MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:106240718-106296012

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Alas1	9	106233455 to 106247954	14499	-	protein coding gene	aminolevulinic acid synthase 1
Tssr91301	9	106243295 to 106243307	12	-	TSS region	transcription start site region 91301
Cpgi22258	9	106247399 to 106248540	1141		CpG island	CpG island 22258
Tssr91302	9	106247427 to 106247459	32	-	TSS region	transcription start site region 91302
Tssr91303	9	106247717 to 106247734	17	-	TSS region	transcription start site region 91303
Tssr91304	9	106247860 to 106247874	14	-	TSS region	transcription start site region 91304
Tssr91305	9	106247903 to 106247912	9	-	TSS region	transcription start site region 91305
Tssr86877	9	106247930 to 106247960	30	+	TSS region	transcription start site region 86877
4930500F10Rik	9	106247960 to 106249413	1453	+	antisense lncRNA gene	RIKEN cDNA 4930500F10 gene
Tssr91306	9	106251016 to 106251031	15	-	TSS region	transcription start site region 91306
Gm33564	9	106260718 to 106276012	15294	+	lncRNA gene	predicted gene, 33564
Tssr91307	9	106269425 to 106269461	36	-	TSS region	transcription start site region 91307
Tssr86878	9	106270962 to 106270970	8	+	TSS region	transcription start site region 86878
Cpgi22259	9	106280864 to 106281733	869		CpG island	CpG island 22259
Tssr86879	9	106281012 to 106281042	30	+	TSS region	transcription start site region 86879
Poc1a	9	106281022 to 106349891	68869	+	protein coding gene	POC1 centriolar protein A
Tssr86880	9	106281350 to 106281410	60	+	TSS region	transcription start site region 86880
Alpq8	9	106284925 to 106284925	0		QTL	alcohol preference QTL 8