Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:103425355-103575401

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
5830418P13Rik 9 103423578 to 103461260 37682 + antisense lncRNA gene RIKEN cDNA 5830418P13 gene
Bfsp2 9 103424924 to 103480328 55404 - protein coding gene beaded filament structural protein 2, phakinin
Tssr91206 9 103426438 to 103426451 13 - TSS region transcription start site region 91206
Tssr86794 9 103426543 to 103426558 15 + TSS region transcription start site region 86794
Tssr86795 9 103426585 to 103426606 21 + TSS region transcription start site region 86795
Tssr86796 9 103426621 to 103426631 10 + TSS region transcription start site region 86796
Tssr86797 9 103426637 to 103426647 10 + TSS region transcription start site region 86797
Tssr86798 9 103426672 to 103426675 3 + TSS region transcription start site region 86798
Tssr86799 9 103427486 to 103427501 15 + TSS region transcription start site region 86799
D9Mgc26 9 103438227 to 103438476 249 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 26
Tssr86800 9 103442516 to 103442544 28 + TSS region transcription start site region 86800
Tssr91207 9 103449108 to 103449117 9 - TSS region transcription start site region 91207
Tssr91208 9 103449153 to 103449168 15 - TSS region transcription start site region 91208
Tssr91209 9 103449170 to 103449181 11 - TSS region transcription start site region 91209
Tssr91210 9 103449892 to 103449920 28 - TSS region transcription start site region 91210
Tssr86801 9 103457592 to 103457607 15 + TSS region transcription start site region 86801
D9Mgc27 9 103465285 to 103465550 265 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 27
Gm16252 9 103472084 to 103493249 21165 + antisense lncRNA gene predicted gene 16252
Tssr91211 9 103480224 to 103480263 39 - TSS region transcription start site region 91211
Tssr91212 9 103480266 to 103480269 3 - TSS region transcription start site region 91212
Tssr91213 9 103480304 to 103480315 11 - TSS region transcription start site region 91213
Tssr91214 9 103480336 to 103480348 12 - TSS region transcription start site region 91214
Tssr91215 9 103480366 to 103480373 7 - TSS region transcription start site region 91215
Tmem108 9 103482947 to 103761837 278890 - protein coding gene transmembrane protein 108
Tssr91216 9 103489301 to 103489310 9 - TSS region transcription start site region 91216
Tssr91217 9 103489321 to 103489344 23 - TSS region transcription start site region 91217
Tssr91218 9 103489349 to 103489376 27 - TSS region transcription start site region 91218
Tssr91219 9 103499221 to 103499260 39 - TSS region transcription start site region 91219
Tssr91220 9 103499292 to 103499299 7 - TSS region transcription start site region 91220
Tssr91221 9 103499320 to 103499326 6 - TSS region transcription start site region 91221
Tssr91222 9 103500355 to 103500401 46 - TSS region transcription start site region 91222
Tssr91223 9 103507086 to 103507126 40 - TSS region transcription start site region 91223
Gm32743 9 103521787 to 103545977 24190 + antisense lncRNA gene predicted gene, 32743
Gm26360 9 103526817 to 103526919 102 - snRNA gene predicted gene, 26360
D9Dcr45 9 103531214 to 103531316 102 DNA segment DNA segment, Chr 9, Derry C. Roopenian 45
Gm37649 9 103541303 to 103543534 2231 - unclassified gene predicted gene, 37649
4932413F04Rik 9 103557090 to 103565891 8801 + antisense lncRNA gene RIKEN cDNA 4932413F04 gene
Gm32682 9 103573387 to 103602847 29460 + lncRNA gene predicted gene, 32682