Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:103310769-103420785

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Topbp1 9 103305215 to 103350428 45213 + protein coding gene topoisomerase (DNA) II binding protein 1
D9Mgc20 9 103327954 to 103328210 256 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 20
Tssr86784 9 103331176 to 103331180 4 + TSS region transcription start site region 86784
Tssr91191 9 103347720 to 103347724 4 - TSS region transcription start site region 91191
Cdv3 9 103353102 to 103365835 12733 - protein coding gene carnitine deficiency-associated gene expressed in ventricle 3
D9Mgc22 9 103357305 to 103357403 98 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 22
Tssr91192 9 103358620 to 103358624 4 - TSS region transcription start site region 91192
Cpgi22235 9 103364482 to 103366217 1735 CpG island CpG island 22235
Tssr91193 9 103364782 to 103364845 63 - TSS region transcription start site region 91193
Tssr91194 9 103364939 to 103364964 25 - TSS region transcription start site region 91194
Tssr91195 9 103364970 to 103364996 26 - TSS region transcription start site region 91195
Tssr91196 9 103365371 to 103365408 37 - TSS region transcription start site region 91196
Tssr91197 9 103365421 to 103365480 59 - TSS region transcription start site region 91197
Tssr91198 9 103365599 to 103365613 14 - TSS region transcription start site region 91198
Tssr91199 9 103365623 to 103365694 71 - TSS region transcription start site region 91199
Tssr91200 9 103365731 to 103365739 8 - TSS region transcription start site region 91200
Tssr91201 9 103365744 to 103365756 12 - TSS region transcription start site region 91201
Tssr91202 9 103365769 to 103365785 16 - TSS region transcription start site region 91202
Tssr91203 9 103365859 to 103365901 42 - TSS region transcription start site region 91203
Tssr86785 9 103367536 to 103367577 41 + TSS region transcription start site region 86785
Tssr86786 9 103368531 to 103368533 2 + TSS region transcription start site region 86786
Gm29600 9 103409169 to 103409545 376 + pseudogene predicted gene 29600
Gm47328 9 103412358 to 103423200 10842 - lincRNA gene predicted gene, 47328
D9Mit242 9 103413367 to 103413516 149 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 242
D9Mgc25 9 103414289 to 103414439 150 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 25