Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:103218238-103358496

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20425 9 103190208 to 103230307 40099 - protein coding gene predicted gene 20425
Trf 9 103208876 to 103230286 21410 - protein coding gene transferrin
Tssr91157 9 103219246 to 103219260 14 - TSS region transcription start site region 91157
Tssr91158 9 103219823 to 103219895 72 - TSS region transcription start site region 91158
Tssr86776 9 103219838 to 103219862 24 + TSS region transcription start site region 86776
Tssr86777 9 103220901 to 103220934 33 + TSS region transcription start site region 86777
Tssr91159 9 103220927 to 103220939 12 - TSS region transcription start site region 91159
Tssr2997 9 103220936 to 103220951 15 + TSS region transcription start site region 2997
Tssr91160 9 103220942 to 103220953 11 - TSS region transcription start site region 91160
Tssr91161 9 103220963 to 103220974 11 - TSS region transcription start site region 91161
Tssr86778 9 103220980 to 103220991 11 + TSS region transcription start site region 86778
Tssr91162 9 103221005 to 103221016 11 - TSS region transcription start site region 91162
Tssr91163 9 103221026 to 103221049 23 - TSS region transcription start site region 91163
Tssr91164 9 103221559 to 103221566 7 - TSS region transcription start site region 91164
Tssr91165 9 103222080 to 103222149 69 - TSS region transcription start site region 91165
Tssr91166 9 103222182 to 103222191 9 - TSS region transcription start site region 91166
Tssr91167 9 103222199 to 103222210 11 - TSS region transcription start site region 91167
Tssr91168 9 103222995 to 103223120 125 - TSS region transcription start site region 91168
Tssr86779 9 103223009 to 103223038 29 + TSS region transcription start site region 86779
Tssr91169 9 103223609 to 103223642 33 - TSS region transcription start site region 91169
Tssr86780 9 103225059 to 103225079 20 + TSS region transcription start site region 86780
Tssr91170 9 103225074 to 103225162 88 - TSS region transcription start site region 91170
Tssr91171 9 103225164 to 103225173 9 - TSS region transcription start site region 91171
Tssr91172 9 103225980 to 103226046 66 - TSS region transcription start site region 91172
Tssr91173 9 103226052 to 103226069 17 - TSS region transcription start site region 91173
Tssr91174 9 103226075 to 103226098 23 - TSS region transcription start site region 91174
Tssr91175 9 103226124 to 103226143 19 - TSS region transcription start site region 91175
Tssr86781 9 103226832 to 103226843 11 + TSS region transcription start site region 86781
Tssr91176 9 103226887 to 103226920 33 - TSS region transcription start site region 91176
Tssr91177 9 103226936 to 103226982 46 - TSS region transcription start site region 91177
Tssr86782 9 103227923 to 103227996 73 + TSS region transcription start site region 86782
Tssr91178 9 103227945 to 103227982 37 - TSS region transcription start site region 91178
Tssr91179 9 103227993 to 103228040 47 - TSS region transcription start site region 91179
Tssr91180 9 103228051 to 103228072 21 - TSS region transcription start site region 91180
Tssr91181 9 103228420 to 103228437 17 - TSS region transcription start site region 91181
Tssr91182 9 103228450 to 103228457 7 - TSS region transcription start site region 91182
Cpgi22233 9 103230137 to 103230438 301 CpG island CpG island 22233
Tssr91183 9 103230262 to 103230280 18 - TSS region transcription start site region 91183
Tssr91184 9 103230296 to 103230309 13 - TSS region transcription start site region 91184
Bbaa17 9 103230401 to 103230530 129 QTL B.burgdorferi-associated arthritis 17
D9Mit24 9 103230401 to 103230530 129 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 24
Tssr91185 9 103230415 to 103230430 15 - TSS region transcription start site region 91185
1300017J02Rik 9 103250523 to 103288297 37774 - protein coding gene RIKEN cDNA 1300017J02 gene
D9Mit347 9 103257298 to 103257420 122 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 347
Tssr91186 9 103259494 to 103259518 24 - TSS region transcription start site region 91186
Gm31701 9 103260343 to 103265874 5531 + lncRNA gene predicted gene, 31701
D9Mgc21 9 103288081 to 103288378 297 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 21
Tssr91187 9 103288225 to 103288256 31 - TSS region transcription start site region 91187
D9Mgc23 9 103288238 to 103288496 258 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 23
Tssr91188 9 103288270 to 103288281 11 - TSS region transcription start site region 91188
Tssr91189 9 103288290 to 103288307 17 - TSS region transcription start site region 91189
Cpgi22234 9 103304803 to 103305735 932 CpG island CpG island 22234
Tssr91190 9 103305049 to 103305084 35 - TSS region transcription start site region 91190
Tssr86783 9 103305156 to 103305255 99 + TSS region transcription start site region 86783
Topbp1 9 103305215 to 103350428 45213 + protein coding gene topoisomerase (DNA) II binding protein 1
D9Mgc20 9 103327954 to 103328210 256 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 20
Tssr86784 9 103331176 to 103331180 4 + TSS region transcription start site region 86784
Tssr91191 9 103347720 to 103347724 4 - TSS region transcription start site region 91191
Cdv3 9 103353102 to 103365835 12733 - protein coding gene carnitine deficiency-associated gene expressed in ventricle 3
D9Mgc22 9 103357305 to 103357403 98 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 22