Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:10309640-11161536

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D9Mit251 9 10324074 to 10324198 124 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 251
Tssr88131 9 10412300 to 10412303 3 - TSS region transcription start site region 88131
Tssr83798 9 10446538 to 10446552 14 + TSS region transcription start site region 83798
Gm46103 9 10475935 to 10476275 340 + pseudogene predicted gene, 46103
D9Mit1009 9 10666974 to 10667134 160 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 1009
Gm7529 9 10734640 to 10736536 1896 + pseudogene predicted gene 7529
2900012M01Rik 9 10789123 to 10790554 1431 unclassified gene RIKEN cDNA 2900012M01 gene
Gm32710 9 10904345 to 10907818 3473 + antisense lncRNA gene predicted gene, 32710
Cpgi21350 9 10904426 to 10905028 602 CpG island CpG island 21350
Tssr88132 9 10904697 to 10904708 11 - TSS region transcription start site region 88132
Tssr88133 9 10904744 to 10904765 21 - TSS region transcription start site region 88133
Tssr88134 9 10904766 to 10904835 69 - TSS region transcription start site region 88134
Cntn5 9 10904775 to 9660891 -1243884 - protein coding gene contactin 5
Tssr88135 9 10904853 to 10904864 11 - TSS region transcription start site region 88135
Gm18488 9 11014450 to 11014813 363 + pseudogene predicted gene, 18488
D9Mit161 9 11059103 to 11059249 146 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 161
Gm47001 9 11102513 to 11119398 16885 + lincRNA gene predicted gene, 47001
Tssr83799 9 11104411 to 11104459 48 + TSS region transcription start site region 83799
Tssr88136 9 11108058 to 11108061 3 - TSS region transcription start site region 88136
Gm47002 9 11148600 to 11167495 18895 + lincRNA gene predicted gene, 47002