Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:103027063-103197068

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slco2a1 9 103007667 to 103087849 80182 + protein coding gene solute carrier organic anion transporter family, member 2a1
Tssr86753 9 103031467 to 103031472 5 + TSS region transcription start site region 86753
Tssr86754 9 103050238 to 103050260 22 + TSS region transcription start site region 86754
Gm47468 9 103082741 to 103085537 2796 - antisense lncRNA gene predicted gene, 47468
Tssr86755 9 103085854 to 103085876 22 + TSS region transcription start site region 86755
Tssr86756 9 103085878 to 103085898 20 + TSS region transcription start site region 86756
Tssr86757 9 103085903 to 103085984 81 + TSS region transcription start site region 86757
Cpgi22228 9 103092205 to 103092650 445 CpG island CpG island 22228
D9Mit169 9 103102384 to 103102503 119 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 169
Gm46128 9 103104504 to 103114026 9522 - lncRNA gene predicted gene, 46128
D9Mit276 9 103110764 to 103110886 122 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 276
Cpgi22229 9 103111135 to 103112965 1830 CpG island CpG island 22229
Tssr86758 9 103111726 to 103111737 11 + TSS region transcription start site region 86758
Tssr86759 9 103111741 to 103111866 125 + TSS region transcription start site region 86759
Tssr86760 9 103111875 to 103111892 17 + TSS region transcription start site region 86760
Tssr86761 9 103111937 to 103111990 53 + TSS region transcription start site region 86761
Tssr86762 9 103111991 to 103112006 15 + TSS region transcription start site region 86762
Tssr86763 9 103112038 to 103112045 7 + TSS region transcription start site region 86763
Tssr86764 9 103112049 to 103112056 7 + TSS region transcription start site region 86764
Tssr86765 9 103112063 to 103112068 5 + TSS region transcription start site region 86765
Tssr86766 9 103112072 to 103112093 21 + TSS region transcription start site region 86766
Rab6b 9 103112074 to 103185276 73202 + protein coding gene RAB6B, member RAS oncogene family
Tssr86767 9 103112094 to 103112149 55 + TSS region transcription start site region 86767
Cpgi22230 9 103119241 to 103119534 293 CpG island CpG island 22230
Gm37166 9 103120368 to 103122841 2473 + unclassified gene predicted gene, 37166
Tssr86768 9 103143366 to 103143385 19 + TSS region transcription start site region 86768
D9Dcr43 9 103144422 to 103144517 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 43
D9Mgc17 9 103151042 to 103151359 317 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 17
D9Mgc18 9 103169184 to 103169312 128 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 18
Cpgi22231 9 103181088 to 103181316 228 CpG island CpG island 22231
Tssr86769 9 103181388 to 103181429 41 + TSS region transcription start site region 86769
Tssr86770 9 103181451 to 103181469 18 + TSS region transcription start site region 86770
Tssr86771 9 103183337 to 103183348 11 + TSS region transcription start site region 86771
Tssr86772 9 103183365 to 103183377 12 + TSS region transcription start site region 86772
D9Dcr44 9 103186669 to 103186764 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 44
Srprb 9 103188033 to 103202065 14032 - protein coding gene signal recognition particle receptor, B subunit
Gm20425 9 103190208 to 103230307 40099 - protein coding gene predicted gene 20425