Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:102734920-103008307

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5627 9 102739648 to 102756685 17037 + lincRNA gene predicted gene 5627
D9Mgc14 9 102750452 to 102750601 149 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 14
Gm36958 9 102764635 to 102766509 1874 - unclassified gene predicted gene, 36958
Gm47416 9 102771495 to 102790260 18765 + lincRNA gene predicted gene, 47416
Gm46151 9 102775104 to 102778608 3504 - lncRNA gene predicted gene, 46151
Tssr2995 9 102819769 to 102819799 30 + TSS region transcription start site region 2995
Gm18655 9 102819861 to 102820940 1079 - pseudogene predicted gene, 18655
Cpgi22226 9 102834471 to 102835751 1280 CpG island CpG island 22226
Tssr86740 9 102834864 to 102834947 83 + TSS region transcription start site region 86740
Ryk 9 102834920 to 102908307 73387 + protein coding gene receptor-like tyrosine kinase
Tssr86741 9 102834961 to 102834972 11 + TSS region transcription start site region 86741
Tssr86742 9 102834979 to 102834990 11 + TSS region transcription start site region 86742
Gm47427 9 102851835 to 102852473 638 + unclassified gene predicted gene, 47427
Tssr86743 9 102864512 to 102864523 11 + TSS region transcription start site region 86743
Tssr86744 9 102900203 to 102900210 7 + TSS region transcription start site region 86744
D9Dcr42 9 102922092 to 102922187 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 42
D9Mgc24 9 102977703 to 102977807 104 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 24
Tssr86745 9 102988746 to 102988752 6 + TSS region transcription start site region 86745
Tssr86746 9 102988757 to 102988788 31 + TSS region transcription start site region 86746
Gm31434 9 102989619 to 103002227 12608 - lncRNA gene predicted gene, 31434
Gm25842 9 102991895 to 102992216 321 + unclassified non-coding RNA gene predicted gene, 25842
Slco2a1 9 103007667 to 103087849 80182 + protein coding gene solute carrier organic anion transporter family, member 2a1
Cpgi22227 9 103007791 to 103009012 1221 CpG island CpG island 22227
Tssr86747 9 103007930 to 103007952 22 + TSS region transcription start site region 86747
Tssr86748 9 103007955 to 103007976 21 + TSS region transcription start site region 86748
Tssr86749 9 103007980 to 103007987 7 + TSS region transcription start site region 86749
Tssr86750 9 103008175 to 103008184 9 + TSS region transcription start site region 86750