Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:101687230-102421557

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D9Mgc3 9 101740972 to 101741188 216 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 3
Gm47932 9 101754915 to 101757705 2790 - pseudogene predicted gene, 47932
Gm47933 9 101757753 to 101758863 1110 - pseudogene predicted gene, 47933
Gm47934 9 101758542 to 101758809 267 + pseudogene predicted gene, 47934
Gm29521 9 101770369 to 101862489 92120 - unclassified non-coding RNA gene predicted gene 29521
9630041A04Rik 9 101861841 to 101943228 81387 + protein coding gene RIKEN cDNA 9630041A04 gene
Tssr91117 9 101862394 to 101862401 7 - TSS region transcription start site region 91117
Tssr91118 9 101862411 to 101862426 15 - TSS region transcription start site region 91118
Tssr91119 9 101862443 to 101862465 22 - TSS region transcription start site region 91119
Tssr91120 9 101862497 to 101862508 11 - TSS region transcription start site region 91120
Tssr91121 9 101862657 to 101862666 9 - TSS region transcription start site region 91121
Gm37460 9 101911008 to 101913256 2248 - unclassified gene predicted gene, 37460
Ephb1 9 101922128 to 102354693 432565 - protein coding gene Eph receptor B1
D9Mgc4 9 101924870 to 101925178 308 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 4
D9Mgc5 9 101939585 to 101939845 260 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 5
Tssr86718 9 101989193 to 101989201 8 + TSS region transcription start site region 86718
Gm31326 9 101989260 to 101990307 1047 + lncRNA gene predicted gene, 31326
Tssr86719 9 101991750 to 101991776 26 + TSS region transcription start site region 86719
Tssr86720 9 102051716 to 102051717 1 + TSS region transcription start site region 86720
Gm37562 9 102052230 to 102056557 4327 - unclassified gene predicted gene, 37562
D9Mgc6 9 102096717 to 102096986 269 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 6
D9Mgc7 9 102104203 to 102104351 148 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 7
n-R5s88 9 102127888 to 102128005 117 + rRNA gene nuclear encoded rRNA 5S 88
D9Mgc8 9 102130303 to 102130471 168 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 8
D9Mit358 9 102138467 to 102138583 116 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 358
Gm29388 9 102151242 to 102153717 2475 - sense intronic lncRNA gene predicted gene 29388
Tssr86721 9 102172731 to 102172764 33 + TSS region transcription start site region 86721
Gm37945 9 102172738 to 102177104 4366 + unclassified gene predicted gene, 37945
Gm31233 9 102211762 to 102236746 24984 + lncRNA gene predicted gene, 31233
D9Mgc11 9 102264816 to 102264972 156 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 11
D9Mgc10 9 102264836 to 102264949 113 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 10
D9Mgc9 9 102265299 to 102265421 122 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 9
Gm37260 9 102273736 to 102274986 1250 + unclassified gene predicted gene, 37260
Tssr91122 9 102304512 to 102304527 15 - TSS region transcription start site region 91122
Mir7243 9 102304924 to 102304975 51 - miRNA gene microRNA 7243
D9Mgc32 9 102340681 to 102340847 166 DNA segment DNA segment, Chr 9, MRC UK Mouse Genome Centre 32
Gm26846 9 102345903 to 102354694 8791 + lincRNA gene predicted gene, 26846
Cpgi22219 9 102352483 to 102354987 2504 CpG island CpG island 22219
Tssr91123 9 102354596 to 102354607 11 - TSS region transcription start site region 91123
Tssr91124 9 102354626 to 102354633 7 - TSS region transcription start site region 91124
Tssr91125 9 102354642 to 102354672 30 - TSS region transcription start site region 91125
Tssr91126 9 102354685 to 102354699 14 - TSS region transcription start site region 91126
Gm22894 9 102373118 to 102373220 102 + snRNA gene predicted gene, 22894