Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:100504854-100704988

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nck1 9 100494302 to 100546134 51832 - protein coding gene non-catalytic region of tyrosine kinase adaptor protein 1
Tssr91092 9 100505167 to 100505171 4 - TSS region transcription start site region 91092
Tssr91093 9 100506804 to 100506811 7 - TSS region transcription start site region 91093
Tssr91094 9 100506815 to 100506833 18 - TSS region transcription start site region 91094
Tssr91095 9 100506844 to 100506856 12 - TSS region transcription start site region 91095
Gm28586 9 100530616 to 100531071 455 - sense intronic lncRNA gene predicted gene 28586
Tssr91096 9 100539514 to 100539522 8 - TSS region transcription start site region 91096
Gm46139 9 100540273 to 100551230 10957 + protein coding gene predicted gene, 46139
Cpgi22210 9 100545334 to 100546721 1387 CpG island CpG island 22210
Tssr91097 9 100546054 to 100546092 38 - TSS region transcription start site region 91097
Tssr91098 9 100546093 to 100546139 46 - TSS region transcription start site region 91098
Tssr2988 9 100546251 to 100546321 70 + TSS region transcription start site region 2988
Cpgi22211 9 100551186 to 100551421 235 CpG island CpG island 22211
Slc35g2 9 100552188 to 100571085 18897 - protein coding gene solute carrier family 35, member G2
Cpgi22212 9 100570044 to 100571270 1226 CpG island CpG island 22212
Tssr91099 9 100571049 to 100571128 79 - TSS region transcription start site region 91099
Tssr86698 9 100597686 to 100597724 38 + TSS region transcription start site region 86698
Stag1 9 100597709 to 100958544 360835 + protein coding gene stromal antigen 1
Tssr86699 9 100597953 to 100598002 49 + TSS region transcription start site region 86699
Gm47803 9 100604854 to 100604988 134 - pseudogene predicted gene, 47803
Gm8661 9 100624974 to 100625965 991 - pseudogene predicted gene 8661
Cpgi22213 9 100642690 to 100644676 1986 CpG island CpG island 22213
Tssr86700 9 100643525 to 100643542 17 + TSS region transcription start site region 86700
Tssr86701 9 100643551 to 100643564 13 + TSS region transcription start site region 86701
Tssr86702 9 100643572 to 100643601 29 + TSS region transcription start site region 86702
Tssr86703 9 100643605 to 100643626 21 + TSS region transcription start site region 86703
Tssr86704 9 100643630 to 100643637 7 + TSS region transcription start site region 86704
Tssr86705 9 100643755 to 100643764 9 + TSS region transcription start site region 86705
Tssr86706 9 100645007 to 100645011 4 + TSS region transcription start site region 86706
Tssr86707 9 100645245 to 100645251 6 + TSS region transcription start site region 86707
Tssr86708 9 100649224 to 100649230 6 + TSS region transcription start site region 86708
Gm37204 9 100665839 to 100669799 3960 + unclassified gene predicted gene, 37204
Gm38297 9 100703213 to 100704269 1056 + unclassified gene predicted gene, 38297