Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:9923313-10443334

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lig4 8 9970020 to 9977681 7661 - protein coding gene ligase IV, DNA, ATP-dependent
Cpgi20072 8 9976032 to 9976613 581 CpG island CpG island 20072
Tssr80333 8 9976215 to 9976254 39 - TSS region transcription start site region 80333
Tssr80334 8 9976266 to 9976286 20 - TSS region transcription start site region 80334
Tssr80335 8 9976294 to 9976335 41 - TSS region transcription start site region 80335
Tssr80336 8 9976340 to 9976355 15 - TSS region transcription start site region 80336
Cpgi20073 8 9977548 to 9978595 1047 CpG island CpG island 20073
Tssr80337 8 9977650 to 9977690 40 - TSS region transcription start site region 80337
Tssr76163 8 9977711 to 9977725 14 + TSS region transcription start site region 76163
Abhd13 8 9977717 to 9992155 14438 + protein coding gene abhydrolase domain containing 13
Tssr76164 8 9977733 to 9977763 30 + TSS region transcription start site region 76164
Tssr76165 8 9977766 to 9977788 22 + TSS region transcription start site region 76165
Tssr76166 8 9977810 to 9977848 38 + TSS region transcription start site region 76166
Tssr76167 8 9977851 to 9977872 21 + TSS region transcription start site region 76167
Gm10703 8 10003512 to 10007538 4026 protein coding gene predicted gene 10703
Tnfsf13b 8 10006203 to 10036000 29797 + protein coding gene tumor necrosis factor (ligand) superfamily, member 13b
Tssr76168 8 10006428 to 10006455 27 + TSS region transcription start site region 76168
Tssr76169 8 10006631 to 10006653 22 + TSS region transcription start site region 76169
Tssr76170 8 10006656 to 10006702 46 + TSS region transcription start site region 76170
Tssr76171 8 10006784 to 10006810 26 + TSS region transcription start site region 76171
Cpgi20074 8 10007070 to 10007574 504 CpG island CpG island 20074
Gm44789 8 10016427 to 10019527 3100 - unclassified gene predicted gene 44789
Gm44788 8 10065054 to 10119632 54578 + lincRNA gene predicted gene 44788
Cpgi20075 8 10153657 to 10154434 777 CpG island CpG island 20075
Myo16 8 10153911 to 10634742 480831 + protein coding gene myosin XVI
Tssr76172 8 10153940 to 10153984 44 + TSS region transcription start site region 76172
Tssr76173 8 10154096 to 10154158 62 + TSS region transcription start site region 76173
Tssr76174 8 10183313 to 10183334 21 + TSS region transcription start site region 76174
Tssr76175 8 10249189 to 10249200 11 + TSS region transcription start site region 76175
Cpgi20076 8 10249309 to 10249519 210 CpG island CpG island 20076
Tssr76176 8 10249334 to 10249366 32 + TSS region transcription start site region 76176
D8Mit285 8 10254729 to 10254814 85 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 285
Tssr76177 8 10435789 to 10435799 10 + TSS region transcription start site region 76177