MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:99119019-100210407

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cdh8	8	99024471 to 99416471	392000	-	protein coding gene	cadherin 8
Gm10632	8	99127367 to 99148253	20886		unclassified gene	predicted gene 10632
Gm15681	8	99145386 to 99148089	2703	-	pseudogene	predicted gene 15681
Tssr82575	8	99386713 to 99386717	4	-	TSS region	transcription start site region 82575
Gm15680	8	99397213 to 99506770	109557	-	sense overlapping lncRNA gene	predicted gene 15680
Cpgi20889	8	99415242 to 99417130	1888		CpG island	CpG island 20889
Tssr82576	8	99416329 to 99416348	19	-	TSS region	transcription start site region 82576
Tssr82577	8	99416397 to 99416462	65	-	TSS region	transcription start site region 82577
Tssr82578	8	99416505 to 99416516	11	-	TSS region	transcription start site region 82578
Tssr79014	8	99416585 to 99416599	14	+	TSS region	transcription start site region 79014
A330008L17Rik	8	99416674 to 99733438	316764	+	lincRNA gene	RIKEN cDNA A330008L17 gene
Tssr82579	8	99446750 to 99446754	4	-	TSS region	transcription start site region 82579
Tssr79015	8	99663919 to 99663963	44	+	TSS region	transcription start site region 79015
Tssr79016	8	99664002 to 99664009	7	+	TSS region	transcription start site region 79016
Gm8688	8	99664019 to 99665407	1388	+	pseudogene	predicted gene 8688
Gm19232	8	99826987 to 99827638	651	-	pseudogene	predicted gene, 19232
Impdh2-ps	8	100030558 to 100032102	1544	+	pseudogene	inosine monophosphate dehydrogenase 2, pseudogene
Gm5742	8	100060116 to 100060620	504	+	pseudogene	predicted gene 5742
Tssr79017	8	100160606 to 100160610	4	+	TSS region	transcription start site region 79017