Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:98196585-100636599

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17997 8 98196718 to 98197515 797 - pseudogene predicted gene, 17997
Gm7192 8 98223530 to 98224662 1132 - pseudogene predicted gene 7192
D8Mit164 8 98298556 to 98298699 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 164
D8Mit241 8 98298584 to 98298699 115 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 241
D8Mit84 8 98524266 to 98524410 144 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 84
Wbc1 8 98619151 to 98619151 0 QTL white blood cell count 1
Gm23494 8 98675077 to 98675202 125 - snRNA gene predicted gene, 23494
Gm29817 8 98878726 to 98878897 171 - pseudogene predicted gene, 29817
Tssr79013 8 98882543 to 98882553 10 + TSS region transcription start site region 79013
Gm15679 8 99011886 to 99032740 20854 + antisense lncRNA gene predicted gene 15679
Cdh8 8 99024471 to 99416471 392000 - protein coding gene cadherin 8
Gm45297 8 99045927 to 99049409 3482 - unclassified gene predicted gene 45297
Gm24693 8 99072463 to 99072569 106 + snRNA gene predicted gene, 24693
Gm10632 8 99127367 to 99148253 20886 unclassified gene predicted gene 10632
Gm15681 8 99145386 to 99148089 2703 - pseudogene predicted gene 15681
Tssr82575 8 99386713 to 99386717 4 - TSS region transcription start site region 82575
Gm15680 8 99397213 to 99506770 109557 - sense overlapping lncRNA gene predicted gene 15680
Cpgi20889 8 99415242 to 99417130 1888 CpG island CpG island 20889
Tssr82576 8 99416329 to 99416348 19 - TSS region transcription start site region 82576
Tssr82577 8 99416397 to 99416462 65 - TSS region transcription start site region 82577
Tssr82578 8 99416505 to 99416516 11 - TSS region transcription start site region 82578
Tssr79014 8 99416585 to 99416599 14 + TSS region transcription start site region 79014
A330008L17Rik 8 99416674 to 99733438 316764 + lincRNA gene RIKEN cDNA A330008L17 gene
Tssr82579 8 99446750 to 99446754 4 - TSS region transcription start site region 82579
Tssr79015 8 99663919 to 99663963 44 + TSS region transcription start site region 79015
Tssr79016 8 99664002 to 99664009 7 + TSS region transcription start site region 79016
Gm8688 8 99664019 to 99665407 1388 + pseudogene predicted gene 8688
Gm19232 8 99826987 to 99827638 651 - pseudogene predicted gene, 19232
Impdh2-ps 8 100030558 to 100032102 1544 + pseudogene inosine monophosphate dehydrogenase 2, pseudogene
Gm5742 8 100060116 to 100060620 504 + pseudogene predicted gene 5742
Tssr79017 8 100160606 to 100160610 4 + TSS region transcription start site region 79017
D8Dcr29 8 100270977 to 100271074 97 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 29
Gm45296 8 100438758 to 100438962 204 + pseudogene predicted gene 45296
D8Dcr30 8 100633182 to 100633287 105 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 30
Gm5361 8 100636519 to 100638013 1494 + pseudogene predicted gene 5361