Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:95850315-96740531

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc38a7 8 95835920 to 95853539 17619 - protein coding gene solute carrier family 38, member 7
Cpgi20885 8 95853259 to 95853520 261 CpG island CpG island 20885
Tssr82566 8 95853501 to 95853530 29 - TSS region transcription start site region 82566
Got2 8 95864137 to 95888365 24228 - protein coding gene glutamatic-oxaloacetic transaminase 2, mitochondrial
Tssr82567 8 95864757 to 95864796 39 - TSS region transcription start site region 82567
Gm45760 8 95870814 to 95872595 1781 + unclassified gene predicted gene 45760
Cpgi20886 8 95887557 to 95888670 1113 CpG island CpG island 20886
Tssr82568 8 95888364 to 95888375 11 - TSS region transcription start site region 82568
Tssr82569 8 95888377 to 95888415 38 - TSS region transcription start site region 82569
Tssr82570 8 95888510 to 95888520 10 - TSS region transcription start site region 82570
Gm45895 8 95910574 to 95934042 23468 + lincRNA gene predicted gene 45895
Gm8637 8 95921529 to 95922613 1084 + pseudogene predicted gene 8637
Cpgi20887 8 95951953 to 95952155 202 CpG island CpG island 20887
D8Dcr28 8 95967333 to 95967448 115 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 28
Gm31892 8 96007041 to 96010702 3661 + lncRNA gene predicted gene, 31892
Char2 8 96082178 to 96082403 225 QTL P. chabaudi malaria resistance QTL 2
D8Mit33 8 96082178 to 96082403 225 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 33
Tssr79009 8 96105101 to 96105106 5 + TSS region transcription start site region 79009
Cpgi20888 8 96151093 to 96151262 169 CpG island CpG island 20888
D8Mit11 8 96295315 to 96295531 216 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 11
Gm32005 8 96309519 to 96361523 52004 + lincRNA gene predicted gene, 32005
Gm22780 8 96318487 to 96318618 131 - snoRNA gene predicted gene, 22780
Gm32122 8 96371727 to 96403862 32135 - lincRNA gene predicted gene, 32122
Tssr82571 8 96403858 to 96403872 14 - TSS region transcription start site region 82571
Tssr82572 8 96403880 to 96403892 12 - TSS region transcription start site region 82572
Tssr82573 8 96403900 to 96403905 5 - TSS region transcription start site region 82573
Tssr79010 8 96452966 to 96452972 6 + TSS region transcription start site region 79010
1700047G07Rik 8 96512340 to 96513979 1639 + lincRNA gene RIKEN cDNA 1700047G07 gene
Gm24132 8 96656129 to 96656219 90 + miRNA gene predicted gene, 24132