Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:95434085-95658890

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfap20 8 95420249 to 95434869 14620 - protein coding gene cilia and flagella associated protein 20
Cpgi20873 8 95434043 to 95435171 1128 CpG island CpG island 20873
Tssr82542 8 95434629 to 95434640 11 - TSS region transcription start site region 82542
Tssr82543 8 95434643 to 95434654 11 - TSS region transcription start site region 82543
Tssr82544 8 95434668 to 95434679 11 - TSS region transcription start site region 82544
Tssr82545 8 95434762 to 95434780 18 - TSS region transcription start site region 82545
Tssr82546 8 95434786 to 95434830 44 - TSS region transcription start site region 82546
Tssr2668 8 95434838 to 95434853 15 - TSS region transcription start site region 2668
Tssr82547 8 95434884 to 95434901 17 - TSS region transcription start site region 82547
Csnk2a2 8 95446096 to 95489069 42973 - protein coding gene casein kinase 2, alpha prime polypeptide
Tssr82548 8 95452760 to 95452764 4 - TSS region transcription start site region 82548
Gm45854 8 95468646 to 95472133 3487 + unclassified gene predicted gene 45854
Gm45853 8 95480453 to 95483623 3170 - unclassified gene predicted gene 45853
Cpgi20874 8 95487807 to 95489307 1500 CpG island CpG island 20874
Tssr82549 8 95488700 to 95488707 7 - TSS region transcription start site region 82549
Tssr82550 8 95488774 to 95488852 78 - TSS region transcription start site region 82550
Tssr82551 8 95490021 to 95490058 37 - TSS region transcription start site region 82551
Tssr78987 8 95496446 to 95496469 23 + TSS region transcription start site region 78987
4933406B17Rik 8 95496482 to 95503409 6927 + lincRNA gene RIKEN cDNA 4933406B17 gene
Cbm2 8 95518613 to 95518703 90 QTL cerebellum weight 2
D8Mit312 8 95518613 to 95518703 90 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 312
Cpgi20875 8 95533899 to 95534372 473 CpG island CpG island 20875
Tssr78988 8 95534078 to 95534123 45 + TSS region transcription start site region 78988
Ccdc113 8 95534085 to 95558890 24805 + protein coding gene coiled-coil domain containing 113
Tssr78989 8 95534131 to 95534132 1 + TSS region transcription start site region 78989
Tssr78990 8 95534133 to 95534143 10 + TSS region transcription start site region 78990
Cpgi20876 8 95538091 to 95538364 273 CpG island CpG island 20876
Tssr78991 8 95551789 to 95551792 3 + TSS region transcription start site region 78991
1700112L15Rik 8 95551793 to 95552302 509 + unclassified gene RIKEN cDNA 1700112L15 gene
Prss54 8 95559066 to 95576330 17264 - protein coding gene protease, serine 54
Tssr82552 8 95576245 to 95576256 11 - TSS region transcription start site region 82552
Tssr82553 8 95576262 to 95576286 24 - TSS region transcription start site region 82553
Tssr82554 8 95576289 to 95576333 44 - TSS region transcription start site region 82554
Tssr82555 8 95576334 to 95576340 6 - TSS region transcription start site region 82555
Gm5912 8 95577471 to 95578908 1437 + pseudogene predicted gene 5912
Gm31518 8 95593428 to 95613875 20447 + lincRNA gene predicted gene, 31518
Cpgi20877 8 95601496 to 95601659 163 CpG island CpG island 20877
Tssr78992 8 95601509 to 95601533 24 + TSS region transcription start site region 78992
Gm45702 8 95629173 to 95630391 1218 - lincRNA gene predicted gene 45702
Cpgi20878 8 95633288 to 95633954 666 CpG island CpG island 20878
Tssr78993 8 95633500 to 95633586 86 + TSS region transcription start site region 78993
Gins3 8 95633559 to 95645059 11500 + protein coding gene GINS complex subunit 3 (Psf3 homolog)
Gm39230 8 95653041 to 95657255 4214 + lncRNA gene predicted gene, 39230
Obsty2 8 129018580 to 95518613 -33499967 QTL obesity 2