Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:94748828-94991312

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccl22 8 94745684 to 94751388 5704 + protein coding gene chemokine (C-C motif) ligand 22
Tssr78907 8 94749274 to 94749318 44 + TSS region transcription start site region 78907
Tssr78908 8 94749846 to 94749853 7 + TSS region transcription start site region 78908
Tssr78909 8 94749889 to 94749896 7 + TSS region transcription start site region 78909
Tssr2654 8 94749929 to 94749930 1 + TSS region transcription start site region 2654
Tssr78910 8 94750006 to 94750017 11 + TSS region transcription start site region 78910
Tssr78911 8 94750021 to 94750033 12 + TSS region transcription start site region 78911
Tssr78912 8 94750268 to 94750285 17 + TSS region transcription start site region 78912
Tssr78913 8 94750448 to 94750457 9 + TSS region transcription start site region 78913
Gnb1-ps3 8 94760288 to 94761237 949 + pseudogene guanine nucleotide binding protein (G protein), beta 1, pseudogene 3
Cpgi20854 8 94771865 to 94772404 539 CpG island CpG island 20854
Cx3cl1 8 94772180 to 94782427 10247 + protein coding gene chemokine (C-X3-C motif) ligand 1
Tssr78914 8 94772194 to 94772210 16 + TSS region transcription start site region 78914
Tssr78915 8 94779822 to 94779834 12 + TSS region transcription start site region 78915
Tssr78916 8 94780457 to 94780470 13 + TSS region transcription start site region 78916
Tssr78917 8 94780478 to 94780491 13 + TSS region transcription start site region 78917
Tssr78918 8 94780826 to 94780840 14 + TSS region transcription start site region 78918
Tssr78919 8 94781170 to 94781177 7 + TSS region transcription start site region 78919
1700121C10Rik 8 94794168 to 94802435 8267 unclassified gene RIKEN cDNA 1700121C10 gene
Tssr82512 8 94802463 to 94802464 1 - TSS region transcription start site region 82512
Tssr2655 8 94802470 to 94802473 3 - TSS region transcription start site region 2655
Tssr78920 8 94810446 to 94810461 15 + TSS region transcription start site region 78920
Ccl17 8 94810453 to 94812036 1583 + protein coding gene chemokine (C-C motif) ligand 17
Ciapin1 8 94819818 to 94838372 18554 - protein coding gene cytokine induced apoptosis inhibitor 1
Gm7418 8 94835717 to 94836517 800 + pseudogene predicted pseudogene 7418
Cpgi20855 8 94837636 to 94839012 1376 CpG island CpG island 20855
Tssr82513 8 94838207 to 94838246 39 - TSS region transcription start site region 82513
Tssr82514 8 94838255 to 94838336 81 - TSS region transcription start site region 82514
Tssr78921 8 94838388 to 94838425 37 + TSS region transcription start site region 78921
Coq9 8 94838417 to 94854895 16478 + protein coding gene coenzyme Q9
Tssr82515 8 94838810 to 94838845 35 - TSS region transcription start site region 82515
Tssr82516 8 94838854 to 94838864 10 - TSS region transcription start site region 82516
Cpgi20856 8 94857318 to 94858139 821 CpG island CpG island 20856
Polr2c 8 94857450 to 94864242 6792 + protein coding gene polymerase (RNA) II (DNA directed) polypeptide C
Tssr78922 8 94857474 to 94857494 20 + TSS region transcription start site region 78922
Tssr2656 8 94857528 to 94857558 30 + TSS region transcription start site region 2656
Dok4 8 94863828 to 94876312 12484 - protein coding gene docking protein 4
Cpgi20857 8 94875595 to 94876720 1125 CpG island CpG island 20857
Tssr82517 8 94876250 to 94876263 13 - TSS region transcription start site region 82517
Tssr82518 8 94876269 to 94876321 52 - TSS region transcription start site region 82518
Tssr82519 8 94876324 to 94876335 11 - TSS region transcription start site region 82519
D8Mit109 8 94879159 to 94879291 132 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 109
Cpgi20858 8 94889165 to 94889373 208 CpG island CpG island 20858
D8Mit32 8 94894018 to 94894184 166 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 32
Ccdc102a 8 94902869 to 94918098 15229 - protein coding gene coiled-coil domain containing 102A
Cpgi20859 8 94912905 to 94914043 1138 CpG island CpG island 20859
Cpgi20860 8 94917405 to 94918387 982 CpG island CpG island 20860
Tssr82520 8 94918012 to 94918084 72 - TSS region transcription start site region 82520
Tssr78923 8 94923550 to 94923582 32 + TSS region transcription start site region 78923
Tssr78924 8 94923674 to 94923683 9 + TSS region transcription start site region 78924
Tssr78925 8 94923687 to 94923708 21 + TSS region transcription start site region 78925
Adgrg5 8 94923694 to 94943280 19586 + protein coding gene adhesion G protein-coupled receptor G5
Gm30968 8 94964677 to 94977041 12364 - lncRNA gene predicted gene, 30968
Gm10286 8 94964679 to 94969756 5077 - pseudogene predicted gene 10286
Tssr82521 8 94973327 to 94973330 3 - TSS region transcription start site region 82521
Tssr78926 8 94973567 to 94973569 2 + TSS region transcription start site region 78926
Tssr78927 8 94974686 to 94974700 14 + TSS region transcription start site region 78927
Tssr78928 8 94974704 to 94974721 17 + TSS region transcription start site region 78928
Adgrg1 8 94974756 to 95014208 39452 + protein coding gene adhesion G protein-coupled receptor G1
Tssr78929 8 94976879 to 94976893 14 + TSS region transcription start site region 78929
Tssr2657 8 94976981 to 94976986 5 - TSS region transcription start site region 2657
Tssr78930 8 94977101 to 94977123 22 + TSS region transcription start site region 78930
Cpgi20861 8 94977258 to 94977729 471 CpG island CpG island 20861
Tssr78931 8 94977277 to 94977288 11 + TSS region transcription start site region 78931
Tssr78932 8 94977296 to 94977309 13 + TSS region transcription start site region 78932
Tssr78933 8 94977330 to 94977337 7 + TSS region transcription start site region 78933
Tssr78934 8 94977352 to 94977368 16 + TSS region transcription start site region 78934
Tssr78935 8 94977378 to 94977392 14 + TSS region transcription start site region 78935
Tssr2658 8 94978897 to 94978906 9 + TSS region transcription start site region 2658
Tssr78936 8 94982173 to 94982177 4 + TSS region transcription start site region 78936
Tssr2659 8 94984029 to 94984041 12 + TSS region transcription start site region 2659
Tssr78937 8 94984349 to 94984361 12 + TSS region transcription start site region 78937
Tssr78938 8 94984409 to 94984477 68 + TSS region transcription start site region 78938
Tssr78939 8 94985440 to 94985451 11 + TSS region transcription start site region 78939
Tssr78940 8 94985523 to 94985568 45 + TSS region transcription start site region 78940
Tssr2660 8 94985606 to 94985609 3 + TSS region transcription start site region 2660