Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:94598016-94798285

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Carcdq1 8 39709256 to 94689598 54980342 QTL cardiac collagen deposition QTL 1
Fam192a 8 94574940 to 94601726 26786 - protein coding gene family with sequence similarity 192, member A
Tssr82501 8 94599706 to 94599714 8 - TSS region transcription start site region 82501
Cpgi20849 8 94600936 to 94602871 1935 CpG island CpG island 20849
Tssr82502 8 94601542 to 94601556 14 - TSS region transcription start site region 82502
Tssr82503 8 94601614 to 94601630 16 - TSS region transcription start site region 82503
Tssr82504 8 94601632 to 94601708 76 - TSS region transcription start site region 82504
Tssr82505 8 94601720 to 94601739 19 - TSS region transcription start site region 82505
Tssr78896 8 94601928 to 94602003 75 + TSS region transcription start site region 78896
Rspry1 8 94601941 to 94660276 58335 + protein coding gene ring finger and SPRY domain containing 1
Tssr78897 8 94602012 to 94602029 17 + TSS region transcription start site region 78897
Tssr78898 8 94602085 to 94602111 26 + TSS region transcription start site region 78898
Gm45797 8 94610777 to 94612697 1920 + unclassified gene predicted gene 45797
Gm18002 8 94640942 to 94641524 582 + pseudogene predicted gene, 18002
Cpgi20850 8 94666519 to 94667346 827 CpG island CpG island 20850
Arl2bp 8 94666600 to 94674425 7825 + protein coding gene ADP-ribosylation factor-like 2 binding protein
Tssr78899 8 94666614 to 94666650 36 + TSS region transcription start site region 78899
Tssr78900 8 94666652 to 94666676 24 + TSS region transcription start site region 78900
Tssr78901 8 94666700 to 94666711 11 + TSS region transcription start site region 78901
Tssr78902 8 94666722 to 94666769 47 + TSS region transcription start site region 78902
Tssr78903 8 94666776 to 94666787 11 + TSS region transcription start site region 78903
Tssr82506 8 94666949 to 94666987 38 - TSS region transcription start site region 82506
Tssr78904 8 94667082 to 94667128 46 + TSS region transcription start site region 78904
Tssr82507 8 94667128 to 94667137 9 - TSS region transcription start site region 82507
Tssr82508 8 94667203 to 94667216 13 - TSS region transcription start site region 82508
Pllp 8 94674895 to 94696242 21347 - protein coding gene plasma membrane proteolipid
Gm45767 8 94675606 to 94680166 4560 + antisense lncRNA gene predicted gene 45767
Tssr82509 8 94678725 to 94678739 14 - TSS region transcription start site region 82509
Cpgi20851 8 94695482 to 94696375 893 CpG island CpG island 20851
Tssr2653 8 94696178 to 94696200 22 - TSS region transcription start site region 2653
Tssr82510 8 94696223 to 94696287 64 - TSS region transcription start site region 82510
Gm22846 8 94698016 to 94698285 269 - unclassified non-coding RNA gene predicted gene, 22846
Cpgi20852 8 94703534 to 94703717 183 CpG island CpG island 20852
n-TLcag5 8 94703631 to 94703713 82 + tRNA gene nuclear encoded tRNA leucine 5 (anticodon CAG)
n-TLcag4 8 94704004 to 94704086 82 - tRNA gene nuclear encoded tRNA leucine 4 (anticodon CAG)
Cpgi20853 8 94704230 to 94704760 530 CpG island CpG island 20853
Tssr82511 8 94711400 to 94711422 22 - TSS region transcription start site region 82511
D8Mit210 8 94743583 to 94743730 147 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 210
Tssr78905 8 94745677 to 94745693 16 + TSS region transcription start site region 78905
Ccl22 8 94745684 to 94751388 5704 + protein coding gene chemokine (C-C motif) ligand 22
Tssr78906 8 94746938 to 94746950 12 + TSS region transcription start site region 78906
Tssr78907 8 94749274 to 94749318 44 + TSS region transcription start site region 78907
Tssr78908 8 94749846 to 94749853 7 + TSS region transcription start site region 78908
Tssr78909 8 94749889 to 94749896 7 + TSS region transcription start site region 78909
Tssr2654 8 94749929 to 94749930 1 + TSS region transcription start site region 2654
Tssr78910 8 94750006 to 94750017 11 + TSS region transcription start site region 78910
Tssr78911 8 94750021 to 94750033 12 + TSS region transcription start site region 78911
Tssr78912 8 94750268 to 94750285 17 + TSS region transcription start site region 78912
Tssr78913 8 94750448 to 94750457 9 + TSS region transcription start site region 78913
Gnb1-ps3 8 94760288 to 94761237 949 + pseudogene guanine nucleotide binding protein (G protein), beta 1, pseudogene 3
Cpgi20854 8 94771865 to 94772404 539 CpG island CpG island 20854
Cx3cl1 8 94772180 to 94782427 10247 + protein coding gene chemokine (C-X3-C motif) ligand 1
Tssr78914 8 94772194 to 94772210 16 + TSS region transcription start site region 78914
Tssr78915 8 94779822 to 94779834 12 + TSS region transcription start site region 78915
Tssr78916 8 94780457 to 94780470 13 + TSS region transcription start site region 78916
Tssr78917 8 94780478 to 94780491 13 + TSS region transcription start site region 78917
Tssr78918 8 94780826 to 94780840 14 + TSS region transcription start site region 78918
Tssr78919 8 94781170 to 94781177 7 + TSS region transcription start site region 78919
1700121C10Rik 8 94794168 to 94802435 8267 unclassified gene RIKEN cDNA 1700121C10 gene