Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:93000580-94140693

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128 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc6a2 8 92960418 to 93001667 41249 + protein coding gene solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
Tssr78784 8 93011568 to 93011590 22 + TSS region transcription start site region 78784
Tssr78785 8 93011598 to 93011615 17 + TSS region transcription start site region 78785
Gm45463 8 93011619 to 93041516 29897 + unclassified non-coding RNA gene predicted gene 45463
Tssr78786 8 93012439 to 93012482 43 + TSS region transcription start site region 78786
Tssr78787 8 93017066 to 93017104 38 + TSS region transcription start site region 78787
Ces1a 8 93020214 to 93048192 27978 - protein coding gene carboxylesterase 1A
Ces1b 8 93056728 to 93080017 23289 - protein coding gene carboxylesterase 1B
Tssr82437 8 93079936 to 93079946 10 - TSS region transcription start site region 82437
Tssr82438 8 93079965 to 93079974 9 - TSS region transcription start site region 82438
Ces1c 8 93099015 to 93131283 32268 - protein coding gene carboxylesterase 1C
Tssr82439 8 93100409 to 93100421 12 - TSS region transcription start site region 82439
Tssr82440 8 93121583 to 93121586 3 - TSS region transcription start site region 82440
Tssr82441 8 93123197 to 93123211 14 - TSS region transcription start site region 82441
Tssr82442 8 93130868 to 93130907 39 - TSS region transcription start site region 82442
Tssr82443 8 93131274 to 93131291 17 - TSS region transcription start site region 82443
Gm45910 8 93144487 to 93154437 9950 - pseudogene predicted gene 45910
Tssr82444 8 93154448 to 93154452 4 - TSS region transcription start site region 82444
Tssr78788 8 93159075 to 93159079 4 + TSS region transcription start site region 78788
Ces1d 8 93166072 to 93197804 31732 - protein coding gene carboxylesterase 1D
Tssr78789 8 93175569 to 93175570 1 + TSS region transcription start site region 78789
Tssr82445 8 93187801 to 93187804 3 - TSS region transcription start site region 82445
Gm45909 8 93190328 to 93191358 1030 - unclassified gene predicted gene 45909
Tssr82446 8 93191870 to 93191882 12 - TSS region transcription start site region 82446
Tssr82447 8 93191898 to 93191917 19 - TSS region transcription start site region 82447
Tssr82448 8 93195077 to 93195081 4 - TSS region transcription start site region 82448
Tssr82449 8 93197732 to 93197759 27 - TSS region transcription start site region 82449
Tssr82450 8 93197771 to 93197788 17 - TSS region transcription start site region 82450
Tssr82451 8 93197799 to 93197809 10 - TSS region transcription start site region 82451
Ces1e 8 93201218 to 93229619 28401 - protein coding gene carboxylesterase 1E
Tssr82452 8 93229517 to 93229611 94 - TSS region transcription start site region 82452
Tssr82453 8 93229628 to 93229639 11 - TSS region transcription start site region 82453
Gm45727 8 93238653 to 93251175 12522 - pseudogene predicted gene 45727
Ces1f 8 93256236 to 93279747 23511 - protein coding gene carboxylesterase 1F
Tssr82454 8 93270090 to 93270093 3 - TSS region transcription start site region 82454
Tssr82455 8 93270347 to 93270355 8 - TSS region transcription start site region 82455
Tssr82456 8 93279717 to 93279747 30 - TSS region transcription start site region 82456
Ces1g 8 93302369 to 93337209 34840 - protein coding gene carboxylesterase 1G
D8Mit163 8 93322430 to 93322564 134 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 163
Tssr82457 8 93337195 to 93337216 21 - TSS region transcription start site region 82457
Ces1h 8 93351843 to 93379725 27882 - protein coding gene carboxylesterase 1H
Gm45765 8 93363623 to 93431049 67426 + antisense lncRNA gene predicted gene 45765
Tssr82458 8 93379746 to 93379756 10 - TSS region transcription start site region 82458
Tssr82459 8 93379763 to 93379770 7 - TSS region transcription start site region 82459
Tssr82460 8 93379772 to 93379782 10 - TSS region transcription start site region 82460
Tssr82461 8 93379817 to 93379825 8 - TSS region transcription start site region 82461
Gm45764 8 93398905 to 93403908 5003 + lincRNA gene predicted gene 45764
Tssr78790 8 93398915 to 93398934 19 + TSS region transcription start site region 78790
Gm30132 8 93423541 to 93427654 4113 - lincRNA gene predicted gene, 30132
Tssr82462 8 93427145 to 93427162 17 - TSS region transcription start site region 82462
Cpgi20829 8 93427147 to 93427344 197 CpG island CpG island 20829
Tssr82463 8 93427369 to 93427381 12 - TSS region transcription start site region 82463
Gm45766 8 93430475 to 93437174 6699 - lincRNA gene predicted gene 45766
Ces5a 8 93499064 to 93535830 36766 - protein coding gene carboxylesterase 5A
Tssr82464 8 93500772 to 93500778 6 - TSS region transcription start site region 82464
Tssr82465 8 93535788 to 93535799 11 - TSS region transcription start site region 82465
Tssr82466 8 93535804 to 93535859 55 - TSS region transcription start site region 82466
Tssr82467 8 93535870 to 93535880 10 - TSS region transcription start site region 82467
Gm45708 8 93565977 to 93628624 62647 - lincRNA gene predicted gene 45708
D8Mit83 8 93570580 to 93570693 113 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 83
Gm26843 8 93646386 to 93687958 41572 - lincRNA gene predicted gene, 26843
D8Mit40 8 93694838 to 93694993 155 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 40
Gm30606 8 93706771 to 93712563 5792 - lincRNA gene predicted gene, 30606
D8Mit82 8 93710124 to 93710303 179 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 82
Cpgi20830 8 93715463 to 93715721 258 CpG island CpG island 20830
Gm39224 8 93731231 to 93750223 18992 + lncRNA gene predicted gene, 39224
Gm45786 8 93747575 to 93749852 2277 - unclassified gene predicted gene 45786
Cpgi20831 8 93809760 to 93811550 1790 CpG island CpG island 20831
Tssr82468 8 93810225 to 93810261 36 - TSS region transcription start site region 82468
Tssr78791 8 93810465 to 93810486 21 + TSS region transcription start site region 78791
Tssr78792 8 93810552 to 93810563 11 + TSS region transcription start site region 78792
Gnao1 8 93810561 to 93969388 158827 + protein coding gene guanine nucleotide binding protein, alpha O
Tssr78793 8 93810572 to 93810651 79 + TSS region transcription start site region 78793
Tssr78794 8 93810771 to 93810778 7 + TSS region transcription start site region 78794
Tssr78795 8 93810790 to 93810801 11 + TSS region transcription start site region 78795
Tssr78796 8 93810807 to 93810814 7 + TSS region transcription start site region 78796
Tssr78797 8 93810819 to 93810828 9 + TSS region transcription start site region 78797
Tssr78798 8 93810832 to 93810843 11 + TSS region transcription start site region 78798
Tssr78799 8 93810888 to 93810899 11 + TSS region transcription start site region 78799
Tssr78800 8 93810930 to 93810951 21 + TSS region transcription start site region 78800
Tssr78801 8 93810990 to 93811007 17 + TSS region transcription start site region 78801
Tssr78802 8 93811083 to 93811094 11 + TSS region transcription start site region 78802
Tssr78803 8 93811283 to 93811320 37 + TSS region transcription start site region 78803
Tssr78804 8 93811322 to 93811348 26 + TSS region transcription start site region 78804
4930488L21Rik 8 93811694 to 93813555 1861 - antisense lncRNA gene RIKEN cDNA 4930488L21 gene
Cpgi20832 8 93812700 to 93813801 1101 CpG island CpG island 20832
Tssr82469 8 93812731 to 93812740 9 - TSS region transcription start site region 82469
Tssr82470 8 93813496 to 93813574 78 - TSS region transcription start site region 82470
Tssr82471 8 93813577 to 93813588 11 - TSS region transcription start site region 82471
Gm24159 8 93933835 to 93933936 101 - miRNA gene predicted gene, 24159
Tssr78805 8 93947012 to 93947025 13 + TSS region transcription start site region 78805
Cpgi20833 8 93950222 to 93950455 233 CpG island CpG island 20833
Tssr78806 8 93963267 to 93963279 12 + TSS region transcription start site region 78806
Tssr78807 8 93963483 to 93963499 16 + TSS region transcription start site region 78807
Tssr78808 8 93966863 to 93966877 14 + TSS region transcription start site region 78808
Tssr78809 8 93967033 to 93967054 21 + TSS region transcription start site region 78809
Tssr78810 8 93968855 to 93968895 40 + TSS region transcription start site region 78810
Tssr78811 8 93968936 to 93968953 17 + TSS region transcription start site region 78811
Tssr78812 8 93969117 to 93969154 37 + TSS region transcription start site region 78812
Tssr78813 8 93969166 to 93969184 18 + TSS region transcription start site region 78813
Amfr 8 93971588 to 94012640 41052 - protein coding gene autocrine motility factor receptor
Tssr82472 8 93972103 to 93972107 4 - TSS region transcription start site region 82472
Tssr78814 8 94010483 to 94010490 7 + TSS region transcription start site region 78814
Tssr78815 8 94010514 to 94010548 34 + TSS region transcription start site region 78815
Cpgi20834 8 94011579 to 94013101 1522 CpG island CpG island 20834
Tssr82473 8 94012120 to 94012141 21 - TSS region transcription start site region 82473
Tssr82474 8 94012537 to 94012554 17 - TSS region transcription start site region 82474
Tssr82475 8 94012558 to 94012687 129 - TSS region transcription start site region 82475
Tssr82476 8 94012841 to 94012851 10 - TSS region transcription start site region 82476
Nudt21 8 94019403 to 94037039 17636 - protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 21
D8Ertd575e 8 94031603 to 94031824 221 DNA segment DNA segment, Chr 8, ERATO Doi 575, expressed
Cpgi20835 8 94036589 to 94037933 1344 CpG island CpG island 20835
Tssr82477 8 94037007 to 94037027 20 - TSS region transcription start site region 82477
Tssr82478 8 94037035 to 94037046 11 - TSS region transcription start site region 82478
Ogfod1 8 94037198 to 94067921 30723 + protein coding gene 2-oxoglutarate and iron-dependent oxygenase domain containing 1
Tssr78816 8 94037221 to 94037288 67 + TSS region transcription start site region 78816
Gm45873 8 94048781 to 94050695 1914 + unclassified gene predicted gene 45873
Bbs2 8 94067954 to 94098928 30974 - protein coding gene Bardet-Biedl syndrome 2 (human)
Tssr82479 8 94070206 to 94070248 42 - TSS region transcription start site region 82479
D8Mit209 8 94097044 to 94097187 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 209
Cpgi20836 8 94098138 to 94098879 741 CpG island CpG island 20836
Tssr82480 8 94098342 to 94098388 46 - TSS region transcription start site region 82480
Tssr82481 8 94098431 to 94098442 11 - TSS region transcription start site region 82481
Tssr82482 8 94098490 to 94098534 44 - TSS region transcription start site region 82482
Gm39226 8 94099542 to 94100572 1030 + lncRNA gene predicted gene, 39226
Tssr2647 8 94102277 to 94102284 7 + TSS region transcription start site region 2647
Tssr78817 8 94137197 to 94137213 16 + TSS region transcription start site region 78817
Mt4 8 94137204 to 94139031 1827 + protein coding gene metallothionein 4