Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:92465517-92885623

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Capsq4 8 36163000 to 92728652 56565652 QTL capsaicin sensitivity related QTL 4
nmf242 8 84220392 to 92685497 8465105 heritable phenotypic marker neuroscience mutagenesis facility, 242
Fts 8 90905517 to 92728652 1823135 heritable phenotypic marker fused toes
Gm45336 8 92465767 to 92469665 3898 + lincRNA gene predicted gene 45336
D8Mit267 8 92548074 to 92548180 106 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 267
Tssr78750 8 92549273 to 92549274 1 + TSS region transcription start site region 78750
Cpgi20823 8 92673362 to 92675031 1669 CpG island CpG island 20823
Irx6 8 92674289 to 92680956 6667 + protein coding gene Iroquois homeobox 6
D8Mit284 8 92675517 to 92675623 106 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 284
Lith18 8 92675517 to 92675623 106 QTL lithogenic gene 18
Cpgi20824 8 92678251 to 92678667 416 CpG island CpG island 20824
Gm45505 8 92680172 to 92682194 2022 - antisense lncRNA gene predicted gene 45505
D8Mit248 8 92685348 to 92685497 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 248
Obq16 8 92685348 to 92685497 149 QTL obesity QTL 16
Hdlq16 8 92685348 to 92685497 149 QTL HDL QTL 16
Nhdlq14 8 92685348 to 92685497 149 QTL non-HDL QTL 14
Gm3272 8 92715746 to 92716946 1200 - pseudogene predicted pseudogene 3272
D8Mit240 8 92728530 to 92728652 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 240
Tssr78751 8 92815404 to 92815413 9 + TSS region transcription start site region 78751
Tssr78752 8 92826257 to 92826274 17 + TSS region transcription start site region 78752
Tssr78753 8 92827273 to 92827395 122 + TSS region transcription start site region 78753
Mmp2 8 92827291 to 92853420 26129 + protein coding gene matrix metallopeptidase 2
Cpgi20825 8 92827344 to 92827860 516 CpG island CpG island 20825
Tssr78754 8 92827396 to 92827429 33 + TSS region transcription start site region 78754
Tssr78755 8 92827434 to 92827439 5 + TSS region transcription start site region 78755
Tssr78756 8 92827448 to 92827457 9 + TSS region transcription start site region 78756
Cpgi20826 8 92828543 to 92828707 164 CpG island CpG island 20826
Tssr78757 8 92830764 to 92830807 43 + TSS region transcription start site region 78757
Tssr78758 8 92840162 to 92840175 13 + TSS region transcription start site region 78758
Tssr78759 8 92840223 to 92840235 12 + TSS region transcription start site region 78759
Tssr78760 8 92840432 to 92840457 25 + TSS region transcription start site region 78760
Gm45472 8 92853653 to 92856334 2681 - antisense lncRNA gene predicted gene 45472
Tssr82435 8 92854829 to 92854833 4 - TSS region transcription start site region 82435
Cpgi20827 8 92855148 to 92856066 918 CpG island CpG island 20827
Tssr82436 8 92855256 to 92855298 42 - TSS region transcription start site region 82436
Tssr78761 8 92855319 to 92855400 81 + TSS region transcription start site region 78761
Lpcat2 8 92855339 to 92919279 63940 + protein coding gene lysophosphatidylcholine acyltransferase 2
Tssr78762 8 92855404 to 92855415 11 + TSS region transcription start site region 78762
Tssr78763 8 92864881 to 92864883 2 + TSS region transcription start site region 78763
Tssr78764 8 92880780 to 92880795 15 + TSS region transcription start site region 78764
Tssr78765 8 92882120 to 92882146 26 + TSS region transcription start site region 78765