Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:91950502-92780889

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Capsq4 8 36163000 to 92728652 56565652 QTL capsaicin sensitivity related QTL 4
nmf242 8 84220392 to 92685497 8465105 heritable phenotypic marker neuroscience mutagenesis facility, 242
Fts 8 90905517 to 92728652 1823135 heritable phenotypic marker fused toes
D8Mit147 8 91954072 to 91954211 139 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 147
Gm36670 8 91974263 to 91991849 17586 - lincRNA gene predicted gene, 36670
Gm36843 8 91997594 to 92009006 11412 + lincRNA gene predicted gene, 36843
Gm28516 8 92024442 to 92038438 13996 + lincRNA gene predicted gene 28516
Gm24254 8 92039917 to 92040020 103 + snRNA gene predicted gene, 24254
Tssr82426 8 92059691 to 92059695 4 - TSS region transcription start site region 82426
D8Mit1006 8 92070043 to 92070192 149 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 1006
Tssr78739 8 92097311 to 92097317 6 + TSS region transcription start site region 78739
Gm45332 8 92152096 to 92158266 6170 - lincRNA gene predicted gene 45332
Tssr82427 8 92158274 to 92158283 9 - TSS region transcription start site region 82427
Gm45335 8 92172587 to 92189124 16537 + lincRNA gene predicted gene 45335
Tssr78740 8 92189429 to 92189440 11 + TSS region transcription start site region 78740
Tssr78741 8 92189450 to 92189466 16 + TSS region transcription start site region 78741
Tssr78742 8 92193362 to 92193367 5 + TSS region transcription start site region 78742
Gm45334 8 92233125 to 92247959 14834 + lincRNA gene predicted gene 45334
Tssr2645 8 92251253 to 92251259 6 - TSS region transcription start site region 2645
Crnde 8 92326033 to 92356120 30087 - lncRNA gene colorectal neoplasia differentially expressed (non-protein coding)
Gm21817 8 92336668 to 92339250 2582 - lincRNA gene predicted gene, 21817
Tssr82428 8 92354580 to 92354604 24 - TSS region transcription start site region 82428
Tssr82429 8 92355495 to 92355506 11 - TSS region transcription start site region 82429
Cpgi20818 8 92355587 to 92360909 5322 CpG island CpG island 20818
Tssr82430 8 92355836 to 92355852 16 - TSS region transcription start site region 82430
Tssr2646 8 92355856 to 92355879 23 - TSS region transcription start site region 2646
Tssr82431 8 92355885 to 92355915 30 - TSS region transcription start site region 82431
Tssr78743 8 92355963 to 92356009 46 + TSS region transcription start site region 78743
Tssr82432 8 92356103 to 92356119 16 - TSS region transcription start site region 82432
Tssr82433 8 92356122 to 92356143 21 - TSS region transcription start site region 82433
Tssr82434 8 92357582 to 92357605 23 - TSS region transcription start site region 82434
Tssr78744 8 92357740 to 92357751 11 + TSS region transcription start site region 78744
Tssr78745 8 92357787 to 92357801 14 + TSS region transcription start site region 78745
Irx5 8 92357796 to 92361456 3660 + protein coding gene Iroquois homeobox 5
Tssr78746 8 92357834 to 92357891 57 + TSS region transcription start site region 78746
Tssr78747 8 92357973 to 92357988 15 + TSS region transcription start site region 78747
Tssr78748 8 92358003 to 92358011 8 + TSS region transcription start site region 78748
Tssr78749 8 92358308 to 92358327 19 + TSS region transcription start site region 78749
Cpgi20819 8 92363370 to 92363678 308 CpG island CpG island 20819
Cpgi20820 8 92365502 to 92365889 387 CpG island CpG island 20820
Cpgi20821 8 92366529 to 92366899 370 CpG island CpG island 20821
Cpgi20822 8 92460050 to 92461353 1303 CpG island CpG island 20822
Gm45336 8 92465767 to 92469665 3898 + lincRNA gene predicted gene 45336
D8Mit267 8 92548074 to 92548180 106 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 267
Tssr78750 8 92549273 to 92549274 1 + TSS region transcription start site region 78750
Cpgi20823 8 92673362 to 92675031 1669 CpG island CpG island 20823
Irx6 8 92674289 to 92680956 6667 + protein coding gene Iroquois homeobox 6
Lith18 8 92675517 to 92675623 106 QTL lithogenic gene 18
D8Mit284 8 92675517 to 92675623 106 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 284
Cpgi20824 8 92678251 to 92678667 416 CpG island CpG island 20824
Gm45505 8 92680172 to 92682194 2022 - antisense lncRNA gene predicted gene 45505
D8Mit248 8 92685348 to 92685497 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 248
Hdlq16 8 92685348 to 92685497 149 QTL HDL QTL 16
Obq16 8 92685348 to 92685497 149 QTL obesity QTL 16
Nhdlq14 8 92685348 to 92685497 149 QTL non-HDL QTL 14
Gm3272 8 92715746 to 92716946 1200 - pseudogene predicted pseudogene 3272
D8Mit240 8 92728530 to 92728652 122 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 240