Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:91779691-92339695

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36380 8 91788514 to 91793790 5276 - lincRNA gene predicted gene, 36380
Gm39222 8 91795574 to 91797743 2169 - lncRNA gene predicted gene, 39222
Cpgi20812 8 91797651 to 91798067 416 CpG island CpG island 20812
Irx3 8 91798511 to 91801654 3143 - protein coding gene Iroquois related homeobox 3
Cpgi20813 8 91799330 to 91802515 3185 CpG island CpG island 20813
Tssr82416 8 91800281 to 91800294 13 - TSS region transcription start site region 82416
Tssr78738 8 91800406 to 91800429 23 + TSS region transcription start site region 78738
Tssr82417 8 91801374 to 91801389 15 - TSS region transcription start site region 82417
Tssr82418 8 91801422 to 91801467 45 - TSS region transcription start site region 82418
Tssr82419 8 91801475 to 91801486 11 - TSS region transcription start site region 82419
Tssr82420 8 91801547 to 91801560 13 - TSS region transcription start site region 82420
Tssr82421 8 91801587 to 91801611 24 - TSS region transcription start site region 82421
Tssr2644 8 91801617 to 91801637 20 - TSS region transcription start site region 2644
Tssr82422 8 91801880 to 91801892 12 - TSS region transcription start site region 82422
Tssr82423 8 91801900 to 91801914 14 - TSS region transcription start site region 82423
Tssr82424 8 91801915 to 91801940 25 - TSS region transcription start site region 82424
Tssr82425 8 91801948 to 91801970 22 - TSS region transcription start site region 82425
Irx3os 8 91804234 to 91807377 3143 + antisense lncRNA gene iroquois homeobox 3, opposite strand
Cpgi20814 8 91804307 to 91804796 489 CpG island CpG island 20814
Cpgi20815 8 91805272 to 91805751 479 CpG island CpG island 20815
Cpgi20816 8 91806244 to 91806719 475 CpG island CpG island 20816
Gm39223 8 91822584 to 91830637 8053 + lncRNA gene predicted gene, 39223
Gm28511 8 91865871 to 91872995 7124 + lincRNA gene predicted gene 28511
Cpgi20817 8 91872703 to 91872897 194 CpG island CpG island 20817
Gm28515 8 91907565 to 91913066 5501 - lincRNA gene predicted gene 28515
D8Mit147 8 91954072 to 91954211 139 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 147
Gm36670 8 91974263 to 91991849 17586 - lincRNA gene predicted gene, 36670
Gm36843 8 91997594 to 92009006 11412 + lincRNA gene predicted gene, 36843
Gm28516 8 92024442 to 92038438 13996 + lincRNA gene predicted gene 28516
Gm24254 8 92039917 to 92040020 103 + snRNA gene predicted gene, 24254
Tssr82426 8 92059691 to 92059695 4 - TSS region transcription start site region 82426
D8Mit1006 8 92070043 to 92070192 149 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 1006
Tssr78739 8 92097311 to 92097317 6 + TSS region transcription start site region 78739
Gm45332 8 92152096 to 92158266 6170 - lincRNA gene predicted gene 45332
Tssr82427 8 92158274 to 92158283 9 - TSS region transcription start site region 82427
Gm45335 8 92172587 to 92189124 16537 + lincRNA gene predicted gene 45335
Tssr78740 8 92189429 to 92189440 11 + TSS region transcription start site region 78740
Tssr78741 8 92189450 to 92189466 16 + TSS region transcription start site region 78741
Tssr78742 8 92193362 to 92193367 5 + TSS region transcription start site region 78742
Gm45334 8 92233125 to 92247959 14834 + lincRNA gene predicted gene 45334
Tssr2645 8 92251253 to 92251259 6 - TSS region transcription start site region 2645
Crnde 8 92326033 to 92356120 30087 - lncRNA gene colorectal neoplasia differentially expressed (non-protein coding)
Gm21817 8 92336668 to 92339250 2582 - lincRNA gene predicted gene, 21817