Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:90701145-90932393

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35850 8 90709459 to 90740769 31310 - lincRNA gene predicted gene, 35850
Gm35963 8 90759463 to 90762596 3133 - lincRNA gene predicted gene, 35963
Gm44382 8 90790826 to 90790947 121 - miRNA gene predicted gene, 44382
Gm19935 8 90816145 to 90817393 1248 - lncRNA gene predicted gene, 19935
Tssr82399 8 90816990 to 90817017 27 - TSS region transcription start site region 82399
Tssr82400 8 90817031 to 90817045 14 - TSS region transcription start site region 82400
Tssr82401 8 90817059 to 90817079 20 - TSS region transcription start site region 82401
Tssr82402 8 90817082 to 90817091 9 - TSS region transcription start site region 82402
Tssr82403 8 90817395 to 90817402 7 - TSS region transcription start site region 82403
Tssr78687 8 90828305 to 90828336 31 + TSS region transcription start site region 78687
Chd9 8 90828357 to 91054516 226159 + protein coding gene chromodomain helicase DNA binding protein 9
Cpgi20804 8 90828600 to 90829150 550 CpG island CpG island 20804
Tssr78688 8 90828820 to 90828842 22 + TSS region transcription start site region 78688
Tssr78689 8 90828848 to 90828895 47 + TSS region transcription start site region 78689
Gm45641 8 90848034 to 90849846 1812 - antisense lncRNA gene predicted gene 45641
Tssr78690 8 90858080 to 90858086 6 + TSS region transcription start site region 78690
Tssr78691 8 90861954 to 90861957 3 + TSS region transcription start site region 78691
D8Mit310 8 90863290 to 90863381 91 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 310
Tssr78692 8 90876356 to 90876365 9 + TSS region transcription start site region 78692
Tssr78693 8 90876454 to 90876467 13 + TSS region transcription start site region 78693
Tssr78694 8 90876566 to 90876579 13 + TSS region transcription start site region 78694
Gm45640 8 90876581 to 90878476 1895 + unclassified gene predicted gene 45640
Tssr78695 8 90876600 to 90876635 35 + TSS region transcription start site region 78695
Tssr78696 8 90876637 to 90876669 32 + TSS region transcription start site region 78696
Cpgi20805 8 90877147 to 90877394 247 CpG island CpG island 20805
Tssr78697 8 90884056 to 90884084 28 + TSS region transcription start site region 78697
Gm45643 8 90893155 to 90894638 1483 + unclassified gene predicted gene 45643
Tssr78698 8 90896291 to 90896297 6 + TSS region transcription start site region 78698
Tssr78699 8 90900120 to 90900123 3 + TSS region transcription start site region 78699
D8Mit251 8 90905517 to 90905638 121 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 251
Fts 8 90905517 to 92728652 1823135 heritable phenotypic marker fused toes
Gm6658 8 90906532 to 90908416 1884 - protein coding gene predicted gene 6658
Cpgi20806 8 90907675 to 90909513 1838 CpG island CpG island 20806
Tssr78700 8 90908565 to 90908597 32 + TSS region transcription start site region 78700
Tssr78701 8 90908599 to 90908619 20 + TSS region transcription start site region 78701