MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:90515186-90858063

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm39220	8	90520823 to 90535881	15058	-	lncRNA gene	predicted gene, 39220
Gm45639	8	90669805 to 90674958	5153	-	lincRNA gene	predicted gene 45639
Gm17996	8	90675240 to 90676203	963	-	pseudogene	predicted gene, 17996
Gm45638	8	90685186 to 90688063	2877	-	unclassified gene	predicted gene 45638
Gm35850	8	90709459 to 90740769	31310	-	lincRNA gene	predicted gene, 35850
Gm35963	8	90759463 to 90762596	3133	-	lincRNA gene	predicted gene, 35963
Gm44382	8	90790826 to 90790947	121	-	miRNA gene	predicted gene, 44382
Gm19935	8	90816145 to 90817393	1248	-	lncRNA gene	predicted gene, 19935
Tssr82399	8	90816990 to 90817017	27	-	TSS region	transcription start site region 82399
Tssr82400	8	90817031 to 90817045	14	-	TSS region	transcription start site region 82400
Tssr82401	8	90817059 to 90817079	20	-	TSS region	transcription start site region 82401
Tssr82402	8	90817082 to 90817091	9	-	TSS region	transcription start site region 82402
Tssr82403	8	90817395 to 90817402	7	-	TSS region	transcription start site region 82403
Tssr78687	8	90828305 to 90828336	31	+	TSS region	transcription start site region 78687
Chd9	8	90828357 to 91054516	226159	+	protein coding gene	chromodomain helicase DNA binding protein 9
Cpgi20804	8	90828600 to 90829150	550		CpG island	CpG island 20804
Tssr78688	8	90828820 to 90828842	22	+	TSS region	transcription start site region 78688
Tssr78689	8	90828848 to 90828895	47	+	TSS region	transcription start site region 78689
Gm45641	8	90848034 to 90849846	1812	-	antisense lncRNA gene	predicted gene 45641