Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:88648876-88969010

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nod2 8 88647315 to 88688474 41159 + protein coding gene nucleotide-binding oligomerization domain containing 2
Tssr82361 8 88650123 to 88650139 16 - TSS region transcription start site region 82361
Tssr78660 8 88650535 to 88650546 11 + TSS region transcription start site region 78660
Tssr82362 8 88654198 to 88654201 3 - TSS region transcription start site region 82362
Tssr78661 8 88658021 to 88658048 27 + TSS region transcription start site region 78661
Tssr78662 8 88658075 to 88658098 23 + TSS region transcription start site region 78662
Tssr78663 8 88660009 to 88660027 18 + TSS region transcription start site region 78663
Tssr82363 8 88662361 to 88662364 3 - TSS region transcription start site region 82363
Tssr82364 8 88662373 to 88662384 11 - TSS region transcription start site region 82364
Tssr78664 8 88662551 to 88662578 27 + TSS region transcription start site region 78664
Tssr82365 8 88664279 to 88664290 11 - TSS region transcription start site region 82365
Tssr82366 8 88664291 to 88664314 23 - TSS region transcription start site region 82366
Cpgi20792 8 88665022 to 88665386 364 CpG island CpG island 20792
Tssr78665 8 88678994 to 88679000 6 + TSS region transcription start site region 78665
Tssr78666 8 88680940 to 88680943 3 + TSS region transcription start site region 78666
Tssr78667 8 88693466 to 88693472 6 + TSS region transcription start site region 78667
Cpgi20793 8 88696582 to 88697669 1087 CpG island CpG island 20793
Tssr78668 8 88697022 to 88697033 11 + TSS region transcription start site region 78668
Cyld 8 88697028 to 88751945 54917 + protein coding gene CYLD lysine 63 deubiquitinase
Tssr78669 8 88697038 to 88697077 39 + TSS region transcription start site region 78669
Tssr78670 8 88697084 to 88697108 24 + TSS region transcription start site region 78670
Tssr78671 8 88697118 to 88697138 20 + TSS region transcription start site region 78671
Tssr78672 8 88697308 to 88697393 85 + TSS region transcription start site region 78672
Gm17995 8 88721079 to 88721608 529 - pseudogene predicted gene, 17995
Gm17910 8 88728203 to 88729040 837 - pseudogene predicted gene, 17910
Cpgi20794 8 88757677 to 88757861 184 CpG island CpG island 20794
Rps6-ps2 8 88806391 to 88807137 746 + pseudogene ribosomal protein S6, pseudogene 2
D8Mit207 8 88808876 to 88809010 134 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 207
Gm42034 8 88840301 to 88848306 8005 + lncRNA gene predicted gene, 42034
Gm45504 8 88860968 to 88863074 2106 - unclassified gene predicted gene 45504
Tssr82367 8 88949981 to 88949994 13 - TSS region transcription start site region 82367
Tssr78673 8 88950234 to 88950249 15 + TSS region transcription start site region 78673
Tssr78674 8 88950251 to 88950278 27 + TSS region transcription start site region 78674
Cpgi20795 8 88950436 to 88950900 464 CpG island CpG island 20795
Tssr78675 8 88951729 to 88951779 50 + TSS region transcription start site region 78675