Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:88263778-88593790

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi20784 8 88272201 to 88273080 879 CpG island CpG island 20784
Tssr78624 8 88272253 to 88272265 12 + TSS region transcription start site region 78624
Tssr78625 8 88272284 to 88272298 14 + TSS region transcription start site region 78625
Adcy7 8 88272403 to 88329962 57559 + protein coding gene adenylate cyclase 7
Tssr78626 8 88272438 to 88272451 13 + TSS region transcription start site region 78626
Tssr78627 8 88272581 to 88272585 4 + TSS region transcription start site region 78627
Tssr78628 8 88275385 to 88275404 19 + TSS region transcription start site region 78628
Tssr78629 8 88276310 to 88276359 49 + TSS region transcription start site region 78629
Tssr78630 8 88289028 to 88289076 48 + TSS region transcription start site region 78630
Tssr78631 8 88289078 to 88289091 13 + TSS region transcription start site region 78631
Tssr78632 8 88290552 to 88290575 23 + TSS region transcription start site region 78632
Tssr78633 8 88293763 to 88293795 32 + TSS region transcription start site region 78633
Tssr78634 8 88294222 to 88294236 14 + TSS region transcription start site region 78634
Tssr78635 8 88300374 to 88300384 10 + TSS region transcription start site region 78635
Tssr78636 8 88300404 to 88300439 35 + TSS region transcription start site region 78636
Tssr78637 8 88300442 to 88300460 18 + TSS region transcription start site region 78637
Tssr78638 8 88301168 to 88301170 2 + TSS region transcription start site region 78638
D8Mit268 8 88303082 to 88303192 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 268
Tssr78639 8 88306451 to 88306470 19 + TSS region transcription start site region 78639
Tssr78640 8 88306609 to 88306622 13 + TSS region transcription start site region 78640
Tssr78641 8 88309707 to 88309728 21 + TSS region transcription start site region 78641
Tssr78642 8 88309732 to 88309750 18 + TSS region transcription start site region 78642
Tssr78643 8 88320643 to 88320658 15 + TSS region transcription start site region 78643
Tssr78644 8 88320748 to 88320760 12 + TSS region transcription start site region 78644
Tssr78645 8 88320777 to 88320813 36 + TSS region transcription start site region 78645
Tssr78646 8 88320818 to 88320841 23 + TSS region transcription start site region 78646
Tssr78647 8 88329657 to 88329671 14 + TSS region transcription start site region 78647
Brd7 8 88331039 to 88362194 31155 - protein coding gene bromodomain containing 7
Tssr78648 8 88331056 to 88331060 4 + TSS region transcription start site region 78648
Tssr82344 8 88334178 to 88334191 13 - TSS region transcription start site region 82344
Tssr82345 8 88354711 to 88354742 31 - TSS region transcription start site region 82345
Cpgi20785 8 88361073 to 88362501 1428 CpG island CpG island 20785
Tssr78649 8 88361531 to 88361575 44 + TSS region transcription start site region 78649
Tssr82346 8 88361703 to 88361717 14 - TSS region transcription start site region 82346
Tssr82347 8 88361911 to 88361925 14 - TSS region transcription start site region 82347
Tssr82348 8 88361941 to 88361976 35 - TSS region transcription start site region 82348
Tssr82349 8 88362031 to 88362034 3 - TSS region transcription start site region 82349
Tssr82350 8 88362042 to 88362049 7 - TSS region transcription start site region 82350
Tssr82351 8 88362108 to 88362122 14 - TSS region transcription start site region 82351
Tssr82352 8 88362154 to 88362210 56 - TSS region transcription start site region 82352
Tssr82353 8 88362218 to 88362247 29 - TSS region transcription start site region 82353
Gm34751 8 88381590 to 88389037 7447 - lncRNA gene predicted gene, 34751
Tssr82354 8 88388757 to 88388767 10 - TSS region transcription start site region 82354
Gm45497 8 88391121 to 88392228 1107 + pseudogene predicted gene 45497
D8Mit51 8 88396181 to 88396393 212 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 51
Cd4ts3 8 88396181 to 88396393 212 QTL CD4 T cell subset 3
Gm39218 8 88417460 to 88428840 11380 + lncRNA gene predicted gene, 39218
Tssr78650 8 88428731 to 88428740 9 + TSS region transcription start site region 78650
Tssr78651 8 88428778 to 88428790 12 + TSS region transcription start site region 78651
Tssr78652 8 88428810 to 88428823 13 + TSS region transcription start site region 78652
Tssr78653 8 88428876 to 88428901 25 + TSS region transcription start site region 78653
Cpgi20786 8 88451032 to 88451271 239 CpG island CpG island 20786
Cpgi20787 8 88453845 to 88455192 1347 CpG island CpG island 20787
Tssr82355 8 88454401 to 88454409 8 - TSS region transcription start site region 82355
Cpgi20788 8 88455357 to 88455777 420 CpG island CpG island 20788
Gm34846 8 88480006 to 88485050 5044 + lncRNA gene predicted gene, 34846
Gm35076 8 88512558 to 88519485 6927 + lncRNA gene predicted gene, 35076
Gm35162 8 88519575 to 88521220 1645 - lncRNA gene predicted gene, 35162
Cpgi20789 8 88520825 to 88522455 1630 CpG island CpG island 20789
Tssr82356 8 88521100 to 88521146 46 - TSS region transcription start site region 82356
Tssr78654 8 88521248 to 88521280 32 + TSS region transcription start site region 78654
Tssr78655 8 88521348 to 88521371 23 + TSS region transcription start site region 78655
Nkd1 8 88521354 to 88594884 73530 + protein coding gene naked cuticle 1
D8Mit365 8 88523383 to 88523551 168 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology-365
Gm45496 8 88560033 to 88562949 2916 + unclassified gene predicted gene 45496
Tssr78656 8 88577545 to 88577549 4 + TSS region transcription start site region 78656
Tssr78657 8 88582780 to 88582782 2 + TSS region transcription start site region 78657
Tssr78658 8 88583196 to 88583204 8 + TSS region transcription start site region 78658