Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:87972906-88302919

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi20780 8 87974613 to 87974959 346 CpG island CpG island 20780
Gm39217 8 88024687 to 88034171 9484 + lncRNA gene predicted gene, 39217
Gm2716 8 88051511 to 88070810 19299 - pseudogene predicted gene 2716
Gm18678 8 88074275 to 88074804 529 - pseudogene predicted gene, 18678
D8Mit80 8 88102903 to 88103009 106 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 80
Idd22 8 88102903 to 88103009 106 QTL insulin dependent diabetes susceptibility 22
Tssr82337 8 88108815 to 88108817 2 - TSS region transcription start site region 82337
Tssr78610 8 88115984 to 88115996 12 + TSS region transcription start site region 78610
Tssr82338 8 88118583 to 88118597 14 - TSS region transcription start site region 82338
Cpgi20781 8 88118590 to 88119236 646 CpG island CpG island 20781
Tssr82339 8 88118602 to 88118611 9 - TSS region transcription start site region 82339
Tssr82340 8 88118623 to 88118628 5 - TSS region transcription start site region 82340
Tssr78611 8 88118747 to 88118777 30 + TSS region transcription start site region 78611
Cnep1r1 8 88118769 to 88135110 16341 + protein coding gene CTD nuclear envelope phosphatase 1 regulatory subunit 1
Tssr78612 8 88118779 to 88118816 37 + TSS region transcription start site region 78612
Cpgi20782 8 88137641 to 88138657 1016 CpG island CpG island 20782
Tssr78613 8 88137844 to 88137902 58 + TSS region transcription start site region 78613
Heatr3 8 88137885 to 88171952 34067 + protein coding gene HEAT repeat containing 3
Tssr78614 8 88137906 to 88137919 13 + TSS region transcription start site region 78614
Gm9988 8 88138079 to 88138517 438 - pseudogene predicted gene 9988
Mir7071 8 88138206 to 88138274 68 + miRNA gene microRNA 7071
Tssr82341 8 88171938 to 88171943 5 - TSS region transcription start site region 82341
9430002A10Rik 8 88174560 to 88175034 474 + lincRNA gene RIKEN cDNA 9430002A10 gene
Tssr82342 8 88180200 to 88180201 1 - TSS region transcription start site region 82342
Cpgi20783 8 88198736 to 88200838 2102 CpG island CpG island 20783
Tssr78615 8 88199194 to 88199224 30 + TSS region transcription start site region 78615
Tent4b 8 88199213 to 88259722 60509 + protein coding gene terminal nucleotidyltransferase 4B
Tssr78616 8 88199229 to 88199232 3 + TSS region transcription start site region 78616
Tssr78617 8 88199236 to 88199247 11 + TSS region transcription start site region 78617
Tssr82343 8 88199320 to 88199355 35 - TSS region transcription start site region 82343
Tssr78618 8 88199452 to 88199463 11 + TSS region transcription start site region 78618
Tssr78619 8 88199513 to 88199555 42 + TSS region transcription start site region 78619
Tssr2635 8 88243972 to 88243986 14 + TSS region transcription start site region 2635
Tssr78620 8 88244683 to 88244687 4 + TSS region transcription start site region 78620
Tssr78621 8 88250791 to 88250832 41 + TSS region transcription start site region 78621
Tssr78622 8 88251991 to 88252014 23 + TSS region transcription start site region 78622
Tssr78623 8 88263170 to 88263175 5 + TSS region transcription start site region 78623
Cpgi20784 8 88272201 to 88273080 879 CpG island CpG island 20784
Tssr78624 8 88272253 to 88272265 12 + TSS region transcription start site region 78624
Tssr78625 8 88272284 to 88272298 14 + TSS region transcription start site region 78625
Adcy7 8 88272403 to 88329962 57559 + protein coding gene adenylate cyclase 7
Tssr78626 8 88272438 to 88272451 13 + TSS region transcription start site region 78626
Tssr78627 8 88272581 to 88272585 4 + TSS region transcription start site region 78627
Tssr78628 8 88275385 to 88275404 19 + TSS region transcription start site region 78628
Tssr78629 8 88276310 to 88276359 49 + TSS region transcription start site region 78629
Tssr78630 8 88289028 to 88289076 48 + TSS region transcription start site region 78630
Tssr78631 8 88289078 to 88289091 13 + TSS region transcription start site region 78631
Tssr78632 8 88290552 to 88290575 23 + TSS region transcription start site region 78632
Tssr78633 8 88293763 to 88293795 32 + TSS region transcription start site region 78633
Tssr78634 8 88294222 to 88294236 14 + TSS region transcription start site region 78634
Tssr78635 8 88300374 to 88300384 10 + TSS region transcription start site region 78635
Tssr78636 8 88300404 to 88300439 35 + TSS region transcription start site region 78636
Tssr78637 8 88300442 to 88300460 18 + TSS region transcription start site region 78637
Tssr78638 8 88301168 to 88301170 2 + TSS region transcription start site region 78638