Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:87486810-88134595

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm2694 8 87472812 to 87525554 52742 + lincRNA gene predicted gene 2694
Gm27016 8 87476055 to 87495462 19407 - lincRNA gene predicted gene, 27016
1700120C18Rik 8 87500049 to 87501231 1182 - lincRNA gene RIKEN cDNA 1700120C18 gene
Tssr82322 8 87501218 to 87501243 25 - TSS region transcription start site region 82322
Tssr78606 8 87521373 to 87521378 5 + TSS region transcription start site region 78606
Cpgi20773 8 87536784 to 87536941 157 CpG island CpG island 20773
Tssr78607 8 87563846 to 87563869 23 + TSS region transcription start site region 78607
Tssr78608 8 87563876 to 87563914 38 + TSS region transcription start site region 78608
4933402J07Rik 8 87563907 to 87589197 25290 + protein coding gene RIKEN cDNA 4933402J07 gene
Tssr78609 8 87563922 to 87563931 9 + TSS region transcription start site region 78609
1700096P03Rik 8 87636098 to 87642210 6112 - lncRNA gene RIKEN cDNA 1700096P03 gene
Gm24841 8 87636657 to 87637013 356 + unclassified non-coding RNA gene predicted gene, 24841
Cpgi20774 8 87656480 to 87656913 433 CpG island CpG island 20774
Cpgi20775 8 87660131 to 87660775 644 CpG island CpG island 20775
Zfp423 8 87661810 to 87959595 297785 - protein coding gene zinc finger protein 423
Cpgi20776 8 87662354 to 87663461 1107 CpG island CpG island 20776
Tssr82323 8 87694869 to 87694902 33 - TSS region transcription start site region 82323
Cpgi20777 8 87742129 to 87742367 238 CpG island CpG island 20777
Tssr82324 8 87804390 to 87804402 12 - TSS region transcription start site region 82324
Tssr82325 8 87804411 to 87804463 52 - TSS region transcription start site region 82325
D8Mit57 8 87820882 to 87821044 162 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 57
D8Mit208 8 87866136 to 87866277 141 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 208
Gm34412 8 87926875 to 87929536 2661 + lncRNA gene predicted gene, 34412
Cpgi20778 8 87943492 to 87944181 689 CpG island CpG island 20778
Tssr82326 8 87943557 to 87943589 32 - TSS region transcription start site region 82326
Cpgi20779 8 87958179 to 87962827 4648 CpG island CpG island 20779
Tssr82327 8 87959534 to 87959558 24 - TSS region transcription start site region 82327
Tssr82328 8 87959560 to 87959576 16 - TSS region transcription start site region 82328
Tssr82329 8 87960485 to 87960501 16 - TSS region transcription start site region 82329
Tssr82330 8 87960517 to 87960581 64 - TSS region transcription start site region 82330
Tssr82331 8 87960585 to 87960619 34 - TSS region transcription start site region 82331
Tssr82332 8 87960620 to 87960642 22 - TSS region transcription start site region 82332
Tssr82333 8 87960646 to 87960661 15 - TSS region transcription start site region 82333
Tssr82334 8 87960662 to 87960694 32 - TSS region transcription start site region 82334
Tssr82335 8 87960712 to 87960723 11 - TSS region transcription start site region 82335
Tssr82336 8 87960808 to 87960822 14 - TSS region transcription start site region 82336
Gm42032 8 87968023 to 87968913 890 + lncRNA gene predicted gene, 42032
Cpgi20780 8 87974613 to 87974959 346 CpG island CpG island 20780
Gm39217 8 88024687 to 88034171 9484 + lncRNA gene predicted gene, 39217
Gm2716 8 88051511 to 88070810 19299 - pseudogene predicted gene 2716
Gm18678 8 88074275 to 88074804 529 - pseudogene predicted gene, 18678
Idd22 8 88102903 to 88103009 106 QTL insulin dependent diabetes susceptibility 22
D8Mit80 8 88102903 to 88103009 106 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 80
Tssr82337 8 88108815 to 88108817 2 - TSS region transcription start site region 82337
Tssr78610 8 88115984 to 88115996 12 + TSS region transcription start site region 78610
Tssr82338 8 88118583 to 88118597 14 - TSS region transcription start site region 82338
Cpgi20781 8 88118590 to 88119236 646 CpG island CpG island 20781
Tssr82339 8 88118602 to 88118611 9 - TSS region transcription start site region 82339
Tssr82340 8 88118623 to 88118628 5 - TSS region transcription start site region 82340
Tssr78611 8 88118747 to 88118777 30 + TSS region transcription start site region 78611
Cnep1r1 8 88118769 to 88135110 16341 + protein coding gene CTD nuclear envelope phosphatase 1 regulatory subunit 1
Tssr78612 8 88118779 to 88118816 37 + TSS region transcription start site region 78612