Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:87008404-87458405

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi20769 8 87037772 to 87038547 775 CpG island CpG island 20769
Tssr78589 8 87047689 to 87047714 25 + TSS region transcription start site region 78589
Rps13-ps1 8 87047694 to 87048215 521 + pseudogene ribosomal protein S13, pseudogene 1
Gm18602 8 87051397 to 87052247 850 - pseudogene predicted gene, 18602
Gm5118 8 87093307 to 87100987 7680 + lincRNA gene predicted gene 5118
D8Mit348 8 87098639 to 87098837 198 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 348
Tssr78590 8 87101716 to 87101723 7 + TSS region transcription start site region 78590
Gm34025 8 87143147 to 87146335 3188 - lncRNA gene predicted gene, 34025
Gm27246 8 87167735 to 87188911 21176 + lincRNA gene predicted gene 27246
Gm10637 8 87169747 to 87199850 30103 - lincRNA gene predicted gene 10637
Tssr78591 8 87175370 to 87175374 4 + TSS region transcription start site region 78591
Gm39216 8 87196212 to 87198404 2192 + lncRNA gene predicted gene, 39216
Gm27169 8 87203026 to 87293504 90478 + lincRNA gene predicted gene 27169
Tssr78592 8 87218572 to 87218591 19 + TSS region transcription start site region 78592
Tssr82307 8 87233404 to 87233405 1 - TSS region transcription start site region 82307
Gm18975 8 87241585 to 87242303 718 - pseudogene predicted gene, 18975
D8Mit45 8 87305375 to 87305495 120 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 45
Imraq2 8 87305375 to 87305495 120 QTL immune response to AAV2 QTL 2
Fcsa2 8 87305375 to 87305495 120 QTL femoral cross-sectional area 2
Gm27207 8 87354501 to 87373075 18574 - lincRNA gene predicted gene 27207
Gm27208 8 87381059 to 87387551 6492 - unclassified non-coding RNA gene predicted gene 27208