Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:86419064-86829161

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abcc12 8 86504576 to 86580688 76112 - protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 12
Tssr82287 8 86527683 to 86527729 46 - TSS region transcription start site region 82287
D8Mit150 8 86546828 to 86546964 136 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 150
Tssr82288 8 86580647 to 86580660 13 - TSS region transcription start site region 82288
Tssr82289 8 86580664 to 86580675 11 - TSS region transcription start site region 82289
Gm44348 8 86586962 to 86587083 121 + miRNA gene predicted gene, 44348
Tssr78570 8 86615399 to 86615401 2 + TSS region transcription start site region 78570
D8Mit239 8 86620792 to 86620916 124 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 239
Cpgi20764 8 86623665 to 86624702 1037 CpG island CpG island 20764
Lonp2 8 86624043 to 86716636 92593 + protein coding gene lon peptidase 2, peroxisomal
Tssr78571 8 86624064 to 86624161 97 + TSS region transcription start site region 78571
Gm16177 8 86659318 to 86660035 717 - pseudogene predicted gene 16177
Gm22305 8 86671236 to 86671343 107 - snRNA gene predicted gene, 22305
Tssr82290 8 86686734 to 86686747 13 - TSS region transcription start site region 82290
Tssr82291 8 86686749 to 86686763 14 - TSS region transcription start site region 82291
Siah1a 8 86724007 to 86745934 21927 - protein coding gene siah E3 ubiquitin protein ligase 1A
Tssr82292 8 86728715 to 86728726 11 - TSS region transcription start site region 82292
Cpgi20765 8 86745071 to 86746782 1711 CpG island CpG island 20765
Tssr78572 8 86745447 to 86745472 25 + TSS region transcription start site region 78572
Tssr78573 8 86745500 to 86745515 15 + TSS region transcription start site region 78573
Tssr78574 8 86745536 to 86745554 18 + TSS region transcription start site region 78574
Tssr78575 8 86745590 to 86745601 11 + TSS region transcription start site region 78575
Tssr78576 8 86745602 to 86745632 30 + TSS region transcription start site region 78576
Tssr78577 8 86745655 to 86745660 5 + TSS region transcription start site region 78577
Tssr78578 8 86745679 to 86745684 5 + TSS region transcription start site region 78578
Gm10638 8 86745699 to 86746603 904 + unclassified gene predicted gene 10638
Tssr82293 8 86745950 to 86746054 104 - TSS region transcription start site region 82293
Tssr82294 8 86746093 to 86746123 30 - TSS region transcription start site region 82294
Cpgi20766 8 86757283 to 86757584 301 CpG island CpG island 20766
Tssr82295 8 86764653 to 86764684 31 - TSS region transcription start site region 82295
Tssr82296 8 86786740 to 86786742 2 - TSS region transcription start site region 82296
Gm39215 8 86805454 to 86826230 20776 - lncRNA gene predicted gene, 39215
Tssr78579 8 86806382 to 86806385 3 + TSS region transcription start site region 78579