Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:85712578-85845921

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Itfg1	8	85717578 to 85840921	123343	-	protein coding gene	integrin alpha FG-GAP repeat containing 1
Tssr78563	8	85730810 to 85730828	18	+	TSS region	transcription start site region 78563
Gm39214	8	85730816 to 85765095	34279	+	lincRNA gene	predicted gene, 39214
Tssr82281	8	85760306 to 85760315	9	-	TSS region	transcription start site region 82281
Tssr78564	8	85824294 to 85824330	36	+	TSS region	transcription start site region 78564
Atp5k-ps1	8	85824313 to 85824603	290	+	pseudogene	ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E, pseudogene 1
Cpgi20763	8	85840297 to 85841317	1020		CpG island	CpG island 20763
Tssr82282	8	85840583 to 85840594	11	-	TSS region	transcription start site region 82282
Tssr82283	8	85840608 to 85840642	34	-	TSS region	transcription start site region 82283
Tssr82284	8	85840734 to 85840780	46	-	TSS region	transcription start site region 82284
Tssr82285	8	85840782 to 85840794	12	-	TSS region	transcription start site region 82285
Tssr82286	8	85840877 to 85840957	80	-	TSS region	transcription start site region 82286
Phkb	8	85840959 to 86061376	220417	+	protein coding gene	phosphorylase kinase beta
Tssr78565	8	85840971 to 85841028	57	+	TSS region	transcription start site region 78565