Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:85271291-85501300

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps35 8 85260392 to 85299497 39105 - protein coding gene VPS35 retromer complex component
Tssr82250 8 85286395 to 85286416 21 - TSS region transcription start site region 82250
Cpgi20758 8 85298728 to 85300241 1513 CpG island CpG island 20758
Tssr82251 8 85299483 to 85299535 52 - TSS region transcription start site region 82251
Orc6 8 85299632 to 85308278 8646 + protein coding gene origin recognition complex, subunit 6
Tssr78546 8 85299645 to 85299667 22 + TSS region transcription start site region 78546
Tssr78547 8 85299696 to 85299706 10 + TSS region transcription start site region 78547
Tssr82252 8 85299756 to 85299791 35 - TSS region transcription start site region 82252
Tssr78548 8 85299892 to 85299928 36 + TSS region transcription start site region 78548
Gm22336 8 85315140 to 85315246 106 + snRNA gene predicted gene, 22336
Mylk3 8 85324304 to 85386340 62036 - protein coding gene myosin light chain kinase 3
Tssr82253 8 85328014 to 85328019 5 - TSS region transcription start site region 82253
Tssr82254 8 85336398 to 85336442 44 - TSS region transcription start site region 82254
AA672651 8 85339343 to 85340272 929 + antisense lncRNA gene expressed sequence AA672651
Tssr82255 8 85365041 to 85365062 21 - TSS region transcription start site region 82255
Tssr82256 8 85365317 to 85365334 17 - TSS region transcription start site region 82256
Tssr82257 8 85365341 to 85365353 12 - TSS region transcription start site region 82257
Tssr82258 8 85365382 to 85365411 29 - TSS region transcription start site region 82258
Tssr82259 8 85380734 to 85380745 11 - TSS region transcription start site region 82259
Tssr82260 8 85380964 to 85380984 20 - TSS region transcription start site region 82260
Tssr82261 8 85380996 to 85381053 57 - TSS region transcription start site region 82261
Tssr82262 8 85386226 to 85386240 14 - TSS region transcription start site region 82262
Tssr82263 8 85386245 to 85386259 14 - TSS region transcription start site region 82263
Tssr82264 8 85386291 to 85386300 9 - TSS region transcription start site region 82264
Tssr82265 8 85386310 to 85386345 35 - TSS region transcription start site region 82265
Tssr82266 8 85408015 to 85408019 4 - TSS region transcription start site region 82266
4921524J17Rik 8 85408759 to 85432833 24074 - protein coding gene RIKEN cDNA 4921524J17 gene
Gm45594 8 85414275 to 85414515 240 - pseudogene predicted gene 45594
Tssr78549 8 85421572 to 85421585 13 + TSS region transcription start site region 78549
Tssr82267 8 85425695 to 85425699 4 - TSS region transcription start site region 82267
Cpgi20759 8 85432240 to 85433131 891 CpG island CpG island 20759
1700051O22Rik 8 85432686 to 85433323 637 + unclassified gene RIKEN cDNA 1700051O22 Gene
Tssr82268 8 85432754 to 85432763 9 - TSS region transcription start site region 82268
Tssr82269 8 85432769 to 85432836 67 - TSS region transcription start site region 82269
Tssr82270 8 85432843 to 85432859 16 - TSS region transcription start site region 82270
D8Mit327 8 85480531 to 85480652 121 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 327
Cpgi20760 8 85492205 to 85493450 1245 CpG island CpG island 20760
Tssr78550 8 85492475 to 85492490 15 + TSS region transcription start site region 78550
Tssr78551 8 85492568 to 85492626 58 + TSS region transcription start site region 78551
Gpt2 8 85492617 to 85527560 34943 + protein coding gene glutamic pyruvate transaminase (alanine aminotransferase) 2
Tssr78552 8 85492639 to 85492650 11 + TSS region transcription start site region 78552
Tssr78553 8 85492676 to 85492687 11 + TSS region transcription start site region 78553
Tssr78554 8 85492700 to 85492709 9 + TSS region transcription start site region 78554