Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:84702533-84842590

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lyl1 8 84701457 to 84704715 3258 + protein coding gene lymphoblastomic leukemia 1
Tssr78439 8 84703391 to 84703415 24 + TSS region transcription start site region 78439
Cpgi20708 8 84703667 to 84704592 925 CpG island CpG island 20708
Nfix 8 84704712 to 84800338 95626 - protein coding gene nuclear factor I/X
Cpgi20709 8 84705063 to 84705950 887 CpG island CpG island 20709
Tssr82117 8 84705126 to 84705138 12 - TSS region transcription start site region 82117
Tssr82118 8 84705162 to 84705175 13 - TSS region transcription start site region 82118
Tssr82119 8 84705190 to 84705202 12 - TSS region transcription start site region 82119
Tssr82120 8 84705267 to 84705278 11 - TSS region transcription start site region 82120
Tssr82121 8 84705814 to 84705827 13 - TSS region transcription start site region 82121
Tssr82122 8 84706049 to 84706060 11 - TSS region transcription start site region 82122
Tssr82123 8 84706198 to 84706209 11 - TSS region transcription start site region 82123
Tssr82124 8 84706227 to 84706254 27 - TSS region transcription start site region 82124
Tssr82125 8 84706311 to 84706328 17 - TSS region transcription start site region 82125
Tssr82126 8 84706500 to 84706516 16 - TSS region transcription start site region 82126
Cpgi20710 8 84706577 to 84707203 626 CpG island CpG island 20710
Tssr82127 8 84708505 to 84708516 11 - TSS region transcription start site region 82127
Tssr78440 8 84708625 to 84708645 20 + TSS region transcription start site region 78440
Tssr82128 8 84713793 to 84713804 11 - TSS region transcription start site region 82128
Tssr82129 8 84713812 to 84713828 16 - TSS region transcription start site region 82129
Tssr82130 8 84713833 to 84713846 13 - TSS region transcription start site region 82130
Tssr82131 8 84714256 to 84714288 32 - TSS region transcription start site region 82131
Tssr82132 8 84721671 to 84721697 26 - TSS region transcription start site region 82132
Tssr78441 8 84721682 to 84721748 66 + TSS region transcription start site region 78441
Tssr82133 8 84721699 to 84721713 14 - TSS region transcription start site region 82133
Tssr82134 8 84721720 to 84721731 11 - TSS region transcription start site region 82134
Tssr82135 8 84721783 to 84721823 40 - TSS region transcription start site region 82135
Tssr82136 8 84722898 to 84722921 23 - TSS region transcription start site region 82136
Tssr78442 8 84723003 to 84723022 19 + TSS region transcription start site region 78442
G430095P16Rik 8 84723007 to 84726844 3837 + protein coding gene RIKEN cDNA G430095P16 gene
Tssr78443 8 84723041 to 84723082 41 + TSS region transcription start site region 78443
Tssr82137 8 84723781 to 84723794 13 - TSS region transcription start site region 82137
Tssr82138 8 84723830 to 84723864 34 - TSS region transcription start site region 82138
Tssr82139 8 84726508 to 84726542 34 - TSS region transcription start site region 82139
Tssr82140 8 84727214 to 84727232 18 - TSS region transcription start site region 82140
Tssr82141 8 84727632 to 84727644 12 - TSS region transcription start site region 82141
Tssr82142 8 84736604 to 84736619 15 - TSS region transcription start site region 82142
Cpgi20711 8 84737529 to 84737908 379 CpG island CpG island 20711
Cpgi20712 8 84742570 to 84742832 262 CpG island CpG island 20712
Tssr82143 8 84746221 to 84746250 29 - TSS region transcription start site region 82143
Tssr82144 8 84746269 to 84746286 17 - TSS region transcription start site region 82144
Tssr82145 8 84746306 to 84746335 29 - TSS region transcription start site region 82145
Tssr82146 8 84771890 to 84771908 18 - TSS region transcription start site region 82146
Cpgi20713 8 84771937 to 84772451 514 CpG island CpG island 20713
Tssr82147 8 84771970 to 84771983 13 - TSS region transcription start site region 82147
Tssr82148 8 84771985 to 84772002 17 - TSS region transcription start site region 82148
Tssr82149 8 84772003 to 84772018 15 - TSS region transcription start site region 82149
Tssr82150 8 84772164 to 84772187 23 - TSS region transcription start site region 82150
Tssr82151 8 84772190 to 84772203 13 - TSS region transcription start site region 82151
Tssr82152 8 84772266 to 84772322 56 - TSS region transcription start site region 82152
Tssr82153 8 84772326 to 84772360 34 - TSS region transcription start site region 82153
Tssr82154 8 84772364 to 84772415 51 - TSS region transcription start site region 82154
Tssr82155 8 84772533 to 84772590 57 - TSS region transcription start site region 82155
Tssr82156 8 84773381 to 84773427 46 - TSS region transcription start site region 82156
Tssr82157 8 84773431 to 84773466 35 - TSS region transcription start site region 82157
Tssr82158 8 84773807 to 84773812 5 - TSS region transcription start site region 82158
Cpgi20714 8 84773865 to 84774159 294 CpG island CpG island 20714
Tssr82159 8 84773979 to 84774036 57 - TSS region transcription start site region 82159
Tssr82160 8 84774121 to 84774142 21 - TSS region transcription start site region 82160
Tssr2628 8 84774475 to 84774479 4 - TSS region transcription start site region 2628
Cpgi20715 8 84784238 to 84785341 1103 CpG island CpG island 20715
Cpgi20716 8 84787743 to 84787898 155 CpG island CpG island 20716
Tssr82161 8 84793300 to 84793315 15 - TSS region transcription start site region 82161
Tssr82162 8 84795317 to 84795321 4 - TSS region transcription start site region 82162
Cpgi20717 8 84798725 to 84801011 2286 CpG island CpG island 20717
Tssr82163 8 84800272 to 84800283 11 - TSS region transcription start site region 82163
Tssr82164 8 84800304 to 84800307 3 - TSS region transcription start site region 82164
Tssr82165 8 84800344 to 84800378 34 - TSS region transcription start site region 82165
Tssr82166 8 84800393 to 84800404 11 - TSS region transcription start site region 82166
Tssr82167 8 84800412 to 84800417 5 - TSS region transcription start site region 82167
Tssr78444 8 84803693 to 84803709 16 + TSS region transcription start site region 78444
Cpgi20718 8 84810874 to 84811246 372 CpG island CpG island 20718
Dand5 8 84815405 to 84822823 7418 - protein coding gene DAN domain family member 5, BMP antagonist
Tssr82168 8 84815624 to 84815634 10 - TSS region transcription start site region 82168
Cpgi20719 8 84816278 to 84816484 206 CpG island CpG island 20719
Cpgi20720 8 84823665 to 84824037 372 CpG island CpG island 20720
Cpgi20721 8 84832075 to 84832762 687 CpG island CpG island 20721
Tssr82169 8 84832225 to 84832272 47 - TSS region transcription start site region 82169
Tssr78445 8 84832257 to 84832295 38 + TSS region transcription start site region 78445
Gadd45gip1 8 84832282 to 84835482 3200 + protein coding gene growth arrest and DNA-damage-inducible, gamma interacting protein 1
Rad23a 8 84834652 to 84840748 6096 - protein coding gene RAD23 homolog A, nucleotide excision repair protein
Tssr82170 8 84835323 to 84835347 24 - TSS region transcription start site region 82170
Tssr82171 8 84835521 to 84835549 28 - TSS region transcription start site region 82171
Tssr82172 8 84838564 to 84838589 25 - TSS region transcription start site region 82172
Tssr82173 8 84838599 to 84838623 24 - TSS region transcription start site region 82173
Tssr82174 8 84838626 to 84838687 61 - TSS region transcription start site region 82174
Cpgi20722 8 84840141 to 84840853 712 CpG island CpG island 20722
Tssr82175 8 84840627 to 84840681 54 - TSS region transcription start site region 82175
Calr 8 84842088 to 84846931 4843 - protein coding gene calreticulin
Tssr82176 8 84842451 to 84842467 16 - TSS region transcription start site region 82176
Tssr78446 8 84842499 to 84842503 4 + TSS region transcription start site region 78446
Tssr82177 8 84842512 to 84842521 9 - TSS region transcription start site region 82177
Tssr82178 8 84842533 to 84842542 9 - TSS region transcription start site region 82178
Tssr78447 8 84842565 to 84842586 21 + TSS region transcription start site region 78447