Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:84682214-84772232

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nacc1 8 84670483 to 84687862 17379 - protein coding gene nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
Tssr78429 8 84686300 to 84686348 48 + TSS region transcription start site region 78429
Trmt1 8 84686312 to 84699808 13496 + protein coding gene tRNA methyltransferase 1
Cpgi20705 8 84686809 to 84688036 1227 CpG island CpG island 20705
Tssr82111 8 84687078 to 84687099 21 - TSS region transcription start site region 82111
Tssr82112 8 84687546 to 84687571 25 - TSS region transcription start site region 82112
Tssr82113 8 84687604 to 84687619 15 - TSS region transcription start site region 82113
Tssr82114 8 84687839 to 84687884 45 - TSS region transcription start site region 82114
Tssr82115 8 84687899 to 84687910 11 - TSS region transcription start site region 82115
Tssr78430 8 84689269 to 84689303 34 + TSS region transcription start site region 78430
Tssr78431 8 84689308 to 84689318 10 + TSS region transcription start site region 78431
Cpgi20706 8 84689481 to 84690049 568 CpG island CpG island 20706
Tssr78432 8 84699160 to 84699178 18 + TSS region transcription start site region 78432
Tssr78433 8 84701430 to 84701497 67 + TSS region transcription start site region 78433
Lyl1 8 84701457 to 84704715 3258 + protein coding gene lymphoblastomic leukemia 1
Cpgi20707 8 84701566 to 84702009 443 CpG island CpG island 20707
Tssr82116 8 84701676 to 84701726 50 - TSS region transcription start site region 82116
Tssr78434 8 84701762 to 84701769 7 + TSS region transcription start site region 78434
Tssr78435 8 84701771 to 84701798 27 + TSS region transcription start site region 78435
Tssr78436 8 84701803 to 84701827 24 + TSS region transcription start site region 78436
Tssr78437 8 84701872 to 84701882 10 + TSS region transcription start site region 78437
Tssr78438 8 84701907 to 84701910 3 + TSS region transcription start site region 78438
Tssr78439 8 84703391 to 84703415 24 + TSS region transcription start site region 78439
Cpgi20708 8 84703667 to 84704592 925 CpG island CpG island 20708
Nfix 8 84704712 to 84800338 95626 - protein coding gene nuclear factor I/X
Cpgi20709 8 84705063 to 84705950 887 CpG island CpG island 20709
Tssr82117 8 84705126 to 84705138 12 - TSS region transcription start site region 82117
Tssr82118 8 84705162 to 84705175 13 - TSS region transcription start site region 82118
Tssr82119 8 84705190 to 84705202 12 - TSS region transcription start site region 82119
Tssr82120 8 84705267 to 84705278 11 - TSS region transcription start site region 82120
Tssr82121 8 84705814 to 84705827 13 - TSS region transcription start site region 82121
Tssr82122 8 84706049 to 84706060 11 - TSS region transcription start site region 82122
Tssr82123 8 84706198 to 84706209 11 - TSS region transcription start site region 82123
Tssr82124 8 84706227 to 84706254 27 - TSS region transcription start site region 82124
Tssr82125 8 84706311 to 84706328 17 - TSS region transcription start site region 82125
Tssr82126 8 84706500 to 84706516 16 - TSS region transcription start site region 82126
Cpgi20710 8 84706577 to 84707203 626 CpG island CpG island 20710
Tssr82127 8 84708505 to 84708516 11 - TSS region transcription start site region 82127
Tssr78440 8 84708625 to 84708645 20 + TSS region transcription start site region 78440
Tssr82128 8 84713793 to 84713804 11 - TSS region transcription start site region 82128
Tssr82129 8 84713812 to 84713828 16 - TSS region transcription start site region 82129
Tssr82130 8 84713833 to 84713846 13 - TSS region transcription start site region 82130
Tssr82131 8 84714256 to 84714288 32 - TSS region transcription start site region 82131
Tssr82132 8 84721671 to 84721697 26 - TSS region transcription start site region 82132
Tssr78441 8 84721682 to 84721748 66 + TSS region transcription start site region 78441
Tssr82133 8 84721699 to 84721713 14 - TSS region transcription start site region 82133
Tssr82134 8 84721720 to 84721731 11 - TSS region transcription start site region 82134
Tssr82135 8 84721783 to 84721823 40 - TSS region transcription start site region 82135
Tssr82136 8 84722898 to 84722921 23 - TSS region transcription start site region 82136
Tssr78442 8 84723003 to 84723022 19 + TSS region transcription start site region 78442
G430095P16Rik 8 84723007 to 84726844 3837 + protein coding gene RIKEN cDNA G430095P16 gene
Tssr78443 8 84723041 to 84723082 41 + TSS region transcription start site region 78443
Tssr82137 8 84723781 to 84723794 13 - TSS region transcription start site region 82137
Tssr82138 8 84723830 to 84723864 34 - TSS region transcription start site region 82138
Tssr82139 8 84726508 to 84726542 34 - TSS region transcription start site region 82139
Tssr82140 8 84727214 to 84727232 18 - TSS region transcription start site region 82140
Tssr82141 8 84727632 to 84727644 12 - TSS region transcription start site region 82141
Tssr82142 8 84736604 to 84736619 15 - TSS region transcription start site region 82142
Cpgi20711 8 84737529 to 84737908 379 CpG island CpG island 20711
Cpgi20712 8 84742570 to 84742832 262 CpG island CpG island 20712
Tssr82143 8 84746221 to 84746250 29 - TSS region transcription start site region 82143
Tssr82144 8 84746269 to 84746286 17 - TSS region transcription start site region 82144
Tssr82145 8 84746306 to 84746335 29 - TSS region transcription start site region 82145
Tssr82146 8 84771890 to 84771908 18 - TSS region transcription start site region 82146
Cpgi20713 8 84771937 to 84772451 514 CpG island CpG island 20713
Tssr82147 8 84771970 to 84771983 13 - TSS region transcription start site region 82147
Tssr82148 8 84771985 to 84772002 17 - TSS region transcription start site region 82148
Tssr82149 8 84772003 to 84772018 15 - TSS region transcription start site region 82149
Tssr82150 8 84772164 to 84772187 23 - TSS region transcription start site region 82150
Tssr82151 8 84772190 to 84772203 13 - TSS region transcription start site region 82151