MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:84616340-84656390

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cacna1a	8	84388440 to 84640246	251806	+	protein coding gene	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
Gm16183	8	84611202 to 84617184	5982	-	antisense lncRNA gene	predicted gene 16183
Cpgi20699	8	84617033 to 84617364	331		CpG island	CpG island 20699
Tssr78410	8	84623636 to 84623686	50	+	TSS region	transcription start site region 78410
Gm39212	8	84624087 to 84639255	15168	-	lncRNA gene	predicted gene, 39212
Tssr78411	8	84636340 to 84636390	50	+	TSS region	transcription start site region 78411
Tssr78412	8	84636398 to 84636417	19	+	TSS region	transcription start site region 78412
Cpgi20700	8	84638494 to 84639964	1470		CpG island	CpG island 20700
Tssr78413	8	84638519 to 84638537	18	+	TSS region	transcription start site region 78413
Tssr78414	8	84638538 to 84638592	54	+	TSS region	transcription start site region 78414
Tssr78415	8	84638596 to 84638611	15	+	TSS region	transcription start site region 78415
Tssr78416	8	84638750 to 84638776	26	+	TSS region	transcription start site region 78416
Tssr82102	8	84638883 to 84638901	18	-	TSS region	transcription start site region 82102
Tssr78417	8	84638962 to 84639017	55	+	TSS region	transcription start site region 78417
Gm39211	8	84642119 to 84643273	1154	+	lncRNA gene	predicted gene, 39211
Tssr82103	8	84642840 to 84642848	8	-	TSS region	transcription start site region 82103
Tssr78418	8	84650365 to 84650373	8	+	TSS region	transcription start site region 78418
Tssr78419	8	84653443 to 84653449	6	+	TSS region	transcription start site region 78419