Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:84173375-84194426

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nanos3 8 84173730 to 84176945 3215 - protein coding gene nanos C2HC-type zinc finger 3
Mirc16 8 84178716 to 84178961 245 complex/cluster/region microRNA cluster 16, including Mir181d through Mir181c
Mir181d 8 84178716 to 84178787 71 - miRNA gene microRNA 181d
Mir181c 8 84178873 to 84178961 88 - miRNA gene microRNA 181c
Tssr82070 8 84182160 to 84182164 4 - TSS region transcription start site region 82070
Cpgi20678 8 84183375 to 84184426 1051 CpG island CpG island 20678
Tssr82071 8 84183865 to 84183916 51 - TSS region transcription start site region 82071
Tssr82072 8 84184062 to 84184086 24 - TSS region transcription start site region 82072
Tssr82073 8 84184089 to 84184114 25 - TSS region transcription start site region 82073
Cpgi20679 8 84186752 to 84187268 516 CpG island CpG island 20679
Tssr78369 8 84189977 to 84189980 3 + TSS region transcription start site region 78369
Tssr82074 8 84192060 to 84192108 48 - TSS region transcription start site region 82074
Cpgi20680 8 84192185 to 84193031 846 CpG island CpG island 20680
Tssr78370 8 84192265 to 84192285 20 + TSS region transcription start site region 78370
Tssr82075 8 84192664 to 84192680 16 - TSS region transcription start site region 82075
Gm26887 8 84192774 to 84197667 4893 - lincRNA gene predicted gene, 26887