Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:84171752-84202268

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930432K21Rik 8 84148025 to 84172590 24565 + protein coding gene RIKEN cDNA 4930432K21 gene
Nanos3 8 84173730 to 84176945 3215 - protein coding gene nanos C2HC-type zinc finger 3
Mirc16 8 84178716 to 84178961 245 complex/cluster/region microRNA cluster 16, including Mir181d through Mir181c
Mir181d 8 84178716 to 84178787 71 - miRNA gene microRNA 181d
Mir181c 8 84178873 to 84178961 88 - miRNA gene microRNA 181c
Tssr82070 8 84182160 to 84182164 4 - TSS region transcription start site region 82070
Cpgi20678 8 84183375 to 84184426 1051 CpG island CpG island 20678
Tssr82071 8 84183865 to 84183916 51 - TSS region transcription start site region 82071
Tssr82072 8 84184062 to 84184086 24 - TSS region transcription start site region 82072
Tssr82073 8 84184089 to 84184114 25 - TSS region transcription start site region 82073
Cpgi20679 8 84186752 to 84187268 516 CpG island CpG island 20679
Tssr78369 8 84189977 to 84189980 3 + TSS region transcription start site region 78369
Tssr82074 8 84192060 to 84192108 48 - TSS region transcription start site region 82074
Cpgi20680 8 84192185 to 84193031 846 CpG island CpG island 20680
Tssr78370 8 84192265 to 84192285 20 + TSS region transcription start site region 78370
Tssr82075 8 84192664 to 84192680 16 - TSS region transcription start site region 82075
Gm26887 8 84192774 to 84197667 4893 - lincRNA gene predicted gene, 26887
Cpgi20681 8 84197381 to 84198073 692 CpG island CpG island 20681
Tssr78371 8 84197404 to 84197416 12 + TSS region transcription start site region 78371
Tssr2623 8 84197467 to 84197478 11 - TSS region transcription start site region 2623
Tssr82076 8 84197579 to 84197593 14 - TSS region transcription start site region 82076
Tssr82077 8 84197675 to 84197680 5 - TSS region transcription start site region 82077
Tssr82078 8 84197925 to 84197959 34 - TSS region transcription start site region 82078
Tssr82079 8 84198351 to 84198364 13 - TSS region transcription start site region 82079
Cpgi20682 8 84198363 to 84198812 449 CpG island CpG island 20682
Tssr82080 8 84198368 to 84198394 26 - TSS region transcription start site region 82080
Tssr82081 8 84198403 to 84198423 20 - TSS region transcription start site region 82081
Tssr2624 8 84198763 to 84198786 23 + TSS region transcription start site region 2624
Cpgi20683 8 84200142 to 84201854 1712 CpG island CpG island 20683
Tssr82082 8 84200617 to 84200655 38 - TSS region transcription start site region 82082
Tssr82083 8 84200730 to 84200750 20 - TSS region transcription start site region 82083
Tssr78372 8 84200835 to 84200846 11 + TSS region transcription start site region 78372
Tssr78373 8 84200860 to 84200875 15 + TSS region transcription start site region 78373
Gm37352 8 84200869 to 84203049 2180 + unclassified gene predicted gene, 37352
Tssr78374 8 84200931 to 84200947 16 + TSS region transcription start site region 78374
Tssr82084 8 84201624 to 84201668 44 - TSS region transcription start site region 82084
Tssr78375 8 84201766 to 84201793 27 + TSS region transcription start site region 78375
Tssr82085 8 84201961 to 84201970 9 - TSS region transcription start site region 82085
Tssr82086 8 84201983 to 84201992 9 - TSS region transcription start site region 82086
Tssr82087 8 84202012 to 84202017 5 - TSS region transcription start site region 82087