MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:84053876-84093899

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm10643	8	84063561 to 84065137	1576	-	protein coding gene	predicted gene 10643
C330011M18Rik	8	84065236 to 84067287	2051	-	antisense lncRNA gene	RIKEN cDNA C330011M18 gene
Cpgi20673	8	84066087 to 84067591	1504		CpG island	CpG island 20673
Tssr78347	8	84066384 to 84066398	14	+	TSS region	transcription start site region 78347
Tssr78348	8	84066419 to 84066431	12	+	TSS region	transcription start site region 78348
Tssr82062	8	84066432 to 84066450	18	-	TSS region	transcription start site region 82062
Tssr78349	8	84066824 to 84066882	58	+	TSS region	transcription start site region 78349
Rfx1	8	84066834 to 84096992	30158	+	protein coding gene	regulatory factor X, 1 (influences HLA class II expression)
Tssr78350	8	84066902 to 84066919	17	+	TSS region	transcription start site region 78350
Tssr82063	8	84067283 to 84067288	5	-	TSS region	transcription start site region 82063
Tssr78351	8	84073858 to 84073874	16	+	TSS region	transcription start site region 78351
Tssr78352	8	84073876 to 84073899	23	+	TSS region	transcription start site region 78352
Tssr78353	8	84073900 to 84073919	19	+	TSS region	transcription start site region 78353
Tssr78354	8	84073939 to 84073946	7	+	TSS region	transcription start site region 78354
Tssr78355	8	84084074 to 84084093	19	+	TSS region	transcription start site region 78355
Tssr78356	8	84084094 to 84084106	12	+	TSS region	transcription start site region 78356
Cpgi20674	8	84084551 to 84084974	423		CpG island	CpG island 20674
Mir709	8	84086099 to 84086186	87	+	miRNA gene	microRNA 709