MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:8329701-8639731

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm45076	8	8334081 to 8336213	2132	-	lincRNA gene	predicted gene 45076
Tssr76153	8	8335065 to 8335080	15	+	TSS region	transcription start site region 76153
A630009H07Rik	8	8335077 to 8342428	7351	+	lincRNA gene	RIKEN cDNA A630009H07 gene
Gm31343	8	8377090 to 8391702	14612	+	lincRNA gene	predicted gene, 31343
Gm31135	8	8436606 to 8484728	48122	-	lincRNA gene	predicted gene, 31135
Gm2448	8	8454871 to 8455429	558	-	pseudogene	predicted gene 2448
Tssr80297	8	8457435 to 8457437	2	-	TSS region	transcription start site region 80297
Tssr80298	8	8484701 to 8484731	30	-	TSS region	transcription start site region 80298
Tssr80299	8	8484736 to 8484750	14	-	TSS region	transcription start site region 80299
D530014G21Rik	8	8488302 to 8495535	7233	+	lincRNA gene	RIKEN cDNA D530014G21 gene
Tssr76154	8	8533654 to 8533663	9	+	TSS region	transcription start site region 76154
Gm31463	8	8576522 to 8580342	3820	+	lincRNA gene	predicted gene, 31463
Gm45075	8	8612264 to 8615862	3598	+	lincRNA gene	predicted gene 45075
Efnb2	8	8617434 to 8661242	43808	-	protein coding gene	ephrin B2
Tssr80300	8	8617553 to 8617558	5	-	TSS region	transcription start site region 80300
Tssr80301	8	8618705 to 8618709	4	-	TSS region	transcription start site region 80301
Cpgi20060	8	8620557 to 8621088	531		CpG island	CpG island 20060
Tssr80302	8	8621291 to 8621320	29	-	TSS region	transcription start site region 80302
E230020D15Rik	8	8629175 to 8635073	5898	-	unclassified gene	RIKEN cDNA E230020D15 gene
Gm45074	8	8637966 to 8639205	1239	-	unclassified gene	predicted gene 45074