MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:83240095-83340615

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tbc1d9	8	83165352 to 83272934	107582	+	protein coding gene	TBC1 domain family, member 9
Tssr78252	8	83243101 to 83243112	11	+	TSS region	transcription start site region 78252
Tssr78253	8	83245848 to 83245860	12	+	TSS region	transcription start site region 78253
Tssr78254	8	83251286 to 83251303	17	+	TSS region	transcription start site region 78254
Tssr78255	8	83251308 to 83251324	16	+	TSS region	transcription start site region 78255
Tssr78256	8	83259312 to 83259339	27	+	TSS region	transcription start site region 78256
Gm17999	8	83267086 to 83267627	541	+	pseudogene	predicted gene, 17999
D8Mit247	8	83279652 to 83279780	128		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 247
Cpgi20639	8	83290095 to 83290615	520		CpG island	CpG island 20639
Tssr78257	8	83290342 to 83290358	16	+	TSS region	transcription start site region 78257
Ucp1	8	83290352 to 83298452	8100	+	protein coding gene	uncoupling protein 1 (mitochondrial, proton carrier)
Tssr78258	8	83290623 to 83290670	47	+	TSS region	transcription start site region 78258
Elmod2	8	83312632 to 83332486	19854	-	protein coding gene	ELMO/CED-12 domain containing 2
Cpgi20640	8	83331898 to 83332859	961		CpG island	CpG island 20640
Tssr81998	8	83332367 to 83332370	3	-	TSS region	transcription start site region 81998
Tssr81999	8	83332416 to 83332494	78	-	TSS region	transcription start site region 81999
Gm32327	8	83332569 to 83338952	6383	+	lncRNA gene	predicted gene, 32327
Tssr78259	8	83332611 to 83332647	36	+	TSS region	transcription start site region 78259