Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:82871036-83461054

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf150 8 82863356 to 83091268 227912 + protein coding gene ring finger protein 150
Gm46045 8 82896061 to 82897291 1230 + pseudogene predicted gene, 46045
D8Mit346 8 82930139 to 82930263 124 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 346
Tssr78227 8 82932446 to 82932460 14 + TSS region transcription start site region 78227
Gm18212 8 82952512 to 82953400 888 + pseudogene predicted gene, 18212
Gm45449 8 83082258 to 83086957 4699 - antisense lncRNA gene predicted gene 45449
Tssr78228 8 83084299 to 83084343 44 + TSS region transcription start site region 78228
Tssr78229 8 83085162 to 83085170 8 + TSS region transcription start site region 78229
Tssr81996 8 83086902 to 83086914 12 - TSS region transcription start site region 81996
Tssr78230 8 83087279 to 83087286 7 + TSS region transcription start site region 78230
Tssr78231 8 83087901 to 83087947 46 + TSS region transcription start site region 78231
Tssr81997 8 83106095 to 83106130 35 - TSS region transcription start site region 81997
Tssr78232 8 83153207 to 83153227 20 + TSS region transcription start site region 78232
Tssr78233 8 83155771 to 83155793 22 + TSS region transcription start site region 78233
Tssr78234 8 83155795 to 83155818 23 + TSS region transcription start site region 78234
Gm10645 8 83165081 to 83166170 1089 - protein coding gene predicted gene 10645
Cpgi20638 8 83165260 to 83166409 1149 CpG island CpG island 20638
Tssr78235 8 83165348 to 83165360 12 + TSS region transcription start site region 78235
Tbc1d9 8 83165352 to 83272934 107582 + protein coding gene TBC1 domain family, member 9
Tssr78236 8 83165361 to 83165399 38 + TSS region transcription start site region 78236
Tssr78237 8 83165419 to 83165440 21 + TSS region transcription start site region 78237
Tssr78238 8 83165448 to 83165499 51 + TSS region transcription start site region 78238
Tssr78239 8 83165502 to 83165523 21 + TSS region transcription start site region 78239
Tssr78240 8 83165554 to 83165571 17 + TSS region transcription start site region 78240
Tssr78241 8 83165578 to 83165607 29 + TSS region transcription start site region 78241
Tssr78242 8 83165622 to 83165646 24 + TSS region transcription start site region 78242
Tssr78243 8 83165656 to 83165677 21 + TSS region transcription start site region 78243
Tssr78244 8 83165681 to 83165695 14 + TSS region transcription start site region 78244
Tssr78245 8 83166036 to 83166054 18 + TSS region transcription start site region 78245
Tssr78246 8 83166136 to 83166152 16 + TSS region transcription start site region 78246
Tssr78247 8 83168654 to 83168663 9 + TSS region transcription start site region 78247
Tssr78248 8 83170669 to 83170690 21 + TSS region transcription start site region 78248
Tssr78249 8 83172889 to 83172903 14 + TSS region transcription start site region 78249
D8Mit106 8 83180780 to 83180928 148 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 106
Tssr78250 8 83200856 to 83200874 18 + TSS region transcription start site region 78250
Gm42027 8 83222909 to 83229996 7087 + lncRNA gene predicted gene, 42027
D8Mit265 8 83223760 to 83223860 100 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 265
Tssr78251 8 83236074 to 83236077 3 + TSS region transcription start site region 78251
Tssr78252 8 83243101 to 83243112 11 + TSS region transcription start site region 78252
Tssr78253 8 83245848 to 83245860 12 + TSS region transcription start site region 78253
Tssr78254 8 83251286 to 83251303 17 + TSS region transcription start site region 78254
Tssr78255 8 83251308 to 83251324 16 + TSS region transcription start site region 78255
Tssr78256 8 83259312 to 83259339 27 + TSS region transcription start site region 78256
Gm17999 8 83267086 to 83267627 541 + pseudogene predicted gene, 17999
D8Mit247 8 83279652 to 83279780 128 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 247
Cpgi20639 8 83290095 to 83290615 520 CpG island CpG island 20639
Tssr78257 8 83290342 to 83290358 16 + TSS region transcription start site region 78257
Ucp1 8 83290352 to 83298452 8100 + protein coding gene uncoupling protein 1 (mitochondrial, proton carrier)
Tssr78258 8 83290623 to 83290670 47 + TSS region transcription start site region 78258
Elmod2 8 83312632 to 83332486 19854 - protein coding gene ELMO/CED-12 domain containing 2
Cpgi20640 8 83331898 to 83332859 961 CpG island CpG island 20640
Tssr81998 8 83332367 to 83332370 3 - TSS region transcription start site region 81998
Tssr81999 8 83332416 to 83332494 78 - TSS region transcription start site region 81999
Gm32327 8 83332569 to 83338952 6383 + lncRNA gene predicted gene, 32327
Tssr78259 8 83332611 to 83332647 36 + TSS region transcription start site region 78259
Cpgi20641 8 83348323 to 83348856 533 CpG island CpG island 20641
Tssr78260 8 83348438 to 83348450 12 + TSS region transcription start site region 78260
Tssr78261 8 83348451 to 83348481 30 + TSS region transcription start site region 78261
Mgat4d 8 83348472 to 83379402 30930 + protein coding gene MGAT4 family, member C
Tssr78262 8 83348737 to 83348745 8 + TSS region transcription start site region 78262
Gm15660 8 83352556 to 83353033 477 + pseudogene predicted gene 15660
Gm32377 8 83381469 to 83389473 8004 - lncRNA gene predicted gene, 32377
Cpgi20642 8 83389611 to 83390358 747 CpG island CpG island 20642
Tssr82000 8 83389724 to 83389735 11 - TSS region transcription start site region 82000
Tssr78263 8 83389834 to 83389845 11 + TSS region transcription start site region 78263
Tssr78264 8 83389846 to 83389872 26 + TSS region transcription start site region 78264
Clgn 8 83389867 to 83428552 38685 + protein coding gene calmegin
Tssr78265 8 83389880 to 83389889 9 + TSS region transcription start site region 78265
Scoc 8 83434492 to 83458439 23947 - protein coding gene short coiled-coil protein
Cpgi20643 8 83441849 to 83442858 1009 CpG island CpG island 20643
Tssr82001 8 83442424 to 83442436 12 - TSS region transcription start site region 82001
Tssr82002 8 83442442 to 83442467 25 - TSS region transcription start site region 82002
Tssr82003 8 83442478 to 83442507 29 - TSS region transcription start site region 82003
Tssr82004 8 83442521 to 83442543 22 - TSS region transcription start site region 82004
Tssr82005 8 83442583 to 83442594 11 - TSS region transcription start site region 82005
Tssr82006 8 83442608 to 83442630 22 - TSS region transcription start site region 82006
Tssr82007 8 83442656 to 83442667 11 - TSS region transcription start site region 82007
Tssr82008 8 83458352 to 83458365 13 - TSS region transcription start site region 82008
Tssr82009 8 83458386 to 83458397 11 - TSS region transcription start site region 82009
Tssr82010 8 83458406 to 83458417 11 - TSS region transcription start site region 82010
Tssr82011 8 83458435 to 83458442 7 - TSS region transcription start site region 82011