Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:81992486-82812491

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Char12 8 68269827 to 82600347 14330520 QTL P. chabaudi malaria resistance QTL 12
Inpp4b 8 81342556 to 82127914 785358 + protein coding gene inositol polyphosphate-4-phosphatase, type II
Tssr78213 8 82041774 to 82041791 17 + TSS region transcription start site region 78213
Tssr78214 8 82054105 to 82054111 6 + TSS region transcription start site region 78214
Tssr78215 8 82084332 to 82084335 3 + TSS region transcription start site region 78215
D8Mit234 8 82130681 to 82130801 120 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 234
Gm25267 8 82152720 to 82152782 62 - snRNA gene predicted gene, 25267
Gm9520 8 82160609 to 82161161 552 + pseudogene predicted gene 9520
Gm38590 8 82190625 to 82207362 16737 - lincRNA gene predicted gene, 38590
Tssr81939 8 82207373 to 82207383 10 - TSS region transcription start site region 81939
D8Mit77 8 82224701 to 82224855 154 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 77
D8Mit305 8 82315168 to 82315285 117 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 305
Il15 8 82331632 to 82403222 71590 - protein coding gene interleukin 15
Tssr81940 8 82332476 to 82332505 29 - TSS region transcription start site region 81940
Tssr81941 8 82340727 to 82340738 11 - TSS region transcription start site region 81941
Tssr81942 8 82340773 to 82340787 14 - TSS region transcription start site region 81942
Tssr81943 8 82353408 to 82353422 14 - TSS region transcription start site region 81943
Tssr81944 8 82353452 to 82353480 28 - TSS region transcription start site region 81944
Tssr81945 8 82353495 to 82353531 36 - TSS region transcription start site region 81945
Tssr81946 8 82353550 to 82353584 34 - TSS region transcription start site region 81946
Tssr81947 8 82354333 to 82354347 14 - TSS region transcription start site region 81947
Tssr81948 8 82356165 to 82356178 13 - TSS region transcription start site region 81948
Tssr81949 8 82357014 to 82357032 18 - TSS region transcription start site region 81949
Tssr81950 8 82357395 to 82357406 11 - TSS region transcription start site region 81950
Vtbt5 8 82357768 to 82357920 152 QTL vertebral trabecular bone trait 5
D8Mit75 8 82357768 to 82357920 152 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 75
Tssr81951 8 82358530 to 82358567 37 - TSS region transcription start site region 81951
Tssr81952 8 82367601 to 82367614 13 - TSS region transcription start site region 81952
Tssr81953 8 82367712 to 82367743 31 - TSS region transcription start site region 81953
Tssr81954 8 82372154 to 82372168 14 - TSS region transcription start site region 81954
Tssr81955 8 82372171 to 82372182 11 - TSS region transcription start site region 81955
Tssr81956 8 82372895 to 82372899 4 - TSS region transcription start site region 81956
Tssr81957 8 82379054 to 82379065 11 - TSS region transcription start site region 81957
Tssr81958 8 82379071 to 82379081 10 - TSS region transcription start site region 81958
Tssr81959 8 82380080 to 82380096 16 - TSS region transcription start site region 81959
Tssr81960 8 82380265 to 82380283 18 - TSS region transcription start site region 81960
Tssr81961 8 82380301 to 82380321 20 - TSS region transcription start site region 81961
Tssr81962 8 82389945 to 82389990 45 - TSS region transcription start site region 81962
Tssr81963 8 82391919 to 82391938 19 - TSS region transcription start site region 81963
Tssr81964 8 82391978 to 82391999 21 - TSS region transcription start site region 81964
Tssr81965 8 82392109 to 82392126 17 - TSS region transcription start site region 81965
Tssr81966 8 82392398 to 82392430 32 - TSS region transcription start site region 81966
Tssr81967 8 82392460 to 82392524 64 - TSS region transcription start site region 81967
Tssr81968 8 82392532 to 82392548 16 - TSS region transcription start site region 81968
Tssr81969 8 82392651 to 82392662 11 - TSS region transcription start site region 81969
Tssr81970 8 82394651 to 82394663 12 - TSS region transcription start site region 81970
Tssr81971 8 82398603 to 82398718 115 - TSS region transcription start site region 81971
Tssr81972 8 82401639 to 82401650 11 - TSS region transcription start site region 81972
Tssr81973 8 82401656 to 82401668 12 - TSS region transcription start site region 81973
Tssr81974 8 82401793 to 82401807 14 - TSS region transcription start site region 81974
Tssr81975 8 82401808 to 82401855 47 - TSS region transcription start site region 81975
Tssr78216 8 82401928 to 82401974 46 + TSS region transcription start site region 78216
Tssr81976 8 82402367 to 82402388 21 - TSS region transcription start site region 81976
Tssr81977 8 82402424 to 82402441 17 - TSS region transcription start site region 81977
Tssr81978 8 82402451 to 82402469 18 - TSS region transcription start site region 81978
Tssr81979 8 82402486 to 82402491 5 - TSS region transcription start site region 81979
Tssr81980 8 82402494 to 82402504 10 - TSS region transcription start site region 81980
Tssr81981 8 82402526 to 82402567 41 - TSS region transcription start site region 81981
Tssr81982 8 82402623 to 82402635 12 - TSS region transcription start site region 81982
Tssr81983 8 82402745 to 82402785 40 - TSS region transcription start site region 81983
Tssr81984 8 82402788 to 82402840 52 - TSS region transcription start site region 81984
Tssr81985 8 82402880 to 82402901 21 - TSS region transcription start site region 81985
Tssr81986 8 82402981 to 82402998 17 - TSS region transcription start site region 81986
Tssr81987 8 82403014 to 82403034 20 - TSS region transcription start site region 81987
Tssr81988 8 82403152 to 82403163 11 - TSS region transcription start site region 81988
Tssr81989 8 82403203 to 82403227 24 - TSS region transcription start site region 81989
Tssr81990 8 82403238 to 82403247 9 - TSS region transcription start site region 81990
9530004M14Rik 8 82403315 to 82403718 403 lncRNA gene RIKEN cDNA 9530004M14 gene
Gm25138 8 82409091 to 82409226 135 + snoRNA gene predicted gene, 25138
Tssr81991 8 82420088 to 82420101 13 - TSS region transcription start site region 81991
Gm8167 8 82577767 to 82578724 957 + pseudogene predicted gene 8167
Hbnr11 8 82600207 to 82600347 140 QTL Heligmosomoides bakeri nematode resistance 11
D8Mit195 8 82600207 to 82600347 140 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 195
Tssr81992 8 82660856 to 82660876 20 - TSS region transcription start site region 81992
Tssr2615 8 82682359 to 82682365 6 + TSS region transcription start site region 2615
D8Mit161 8 82743341 to 82743451 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 161
Gm9655 8 82747617 to 82755694 8077 + pseudogene predicted gene 9655
Gm8025 8 82748171 to 82755051 6880 unclassified gene predicted gene 8025
Zfp330 8 82763620 to 82774126 10506 - protein coding gene zinc finger protein 330
Cpgi20636 8 82773780 to 82774327 547 CpG island CpG island 20636
Tssr2616 8 82774078 to 82774087 9 - TSS region transcription start site region 2616
Tssr81993 8 82774106 to 82774163 57 - TSS region transcription start site region 81993
Tssr81994 8 82774170 to 82774181 11 - TSS region transcription start site region 81994
Tssr78217 8 82774234 to 82774263 29 + TSS region transcription start site region 78217
Tssr78218 8 82774767 to 82774776 9 + TSS region transcription start site region 78218
Tssr78219 8 82774790 to 82774796 6 + TSS region transcription start site region 78219
Gm31545 8 82796146 to 82803361 7215 - lincRNA gene predicted gene, 31545