Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:81938369-85228391

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953 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Char12 8 68269827 to 82600347 14330520 QTL P. chabaudi malaria resistance QTL 12
Inpp4b 8 81342556 to 82127914 785358 + protein coding gene inositol polyphosphate-4-phosphatase, type II
Tssr78213 8 82041774 to 82041791 17 + TSS region transcription start site region 78213
Tssr78214 8 82054105 to 82054111 6 + TSS region transcription start site region 78214
Tssr78215 8 82084332 to 82084335 3 + TSS region transcription start site region 78215
D8Mit234 8 82130681 to 82130801 120 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 234
Gm25267 8 82152720 to 82152782 62 - snRNA gene predicted gene, 25267
Gm9520 8 82160609 to 82161161 552 + pseudogene predicted gene 9520
Gm38590 8 82190625 to 82207362 16737 - lincRNA gene predicted gene, 38590
Tssr81939 8 82207373 to 82207383 10 - TSS region transcription start site region 81939
D8Mit77 8 82224701 to 82224855 154 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 77
D8Mit305 8 82315168 to 82315285 117 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 305
Il15 8 82331632 to 82403222 71590 - protein coding gene interleukin 15
Tssr81940 8 82332476 to 82332505 29 - TSS region transcription start site region 81940
Tssr81941 8 82340727 to 82340738 11 - TSS region transcription start site region 81941
Tssr81942 8 82340773 to 82340787 14 - TSS region transcription start site region 81942
Tssr81943 8 82353408 to 82353422 14 - TSS region transcription start site region 81943
Tssr81944 8 82353452 to 82353480 28 - TSS region transcription start site region 81944
Tssr81945 8 82353495 to 82353531 36 - TSS region transcription start site region 81945
Tssr81946 8 82353550 to 82353584 34 - TSS region transcription start site region 81946
Tssr81947 8 82354333 to 82354347 14 - TSS region transcription start site region 81947
Tssr81948 8 82356165 to 82356178 13 - TSS region transcription start site region 81948
Tssr81949 8 82357014 to 82357032 18 - TSS region transcription start site region 81949
Tssr81950 8 82357395 to 82357406 11 - TSS region transcription start site region 81950
Vtbt5 8 82357768 to 82357920 152 QTL vertebral trabecular bone trait 5
D8Mit75 8 82357768 to 82357920 152 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 75
Tssr81951 8 82358530 to 82358567 37 - TSS region transcription start site region 81951
Tssr81952 8 82367601 to 82367614 13 - TSS region transcription start site region 81952
Tssr81953 8 82367712 to 82367743 31 - TSS region transcription start site region 81953
Tssr81954 8 82372154 to 82372168 14 - TSS region transcription start site region 81954
Tssr81955 8 82372171 to 82372182 11 - TSS region transcription start site region 81955
Tssr81956 8 82372895 to 82372899 4 - TSS region transcription start site region 81956
Tssr81957 8 82379054 to 82379065 11 - TSS region transcription start site region 81957
Tssr81958 8 82379071 to 82379081 10 - TSS region transcription start site region 81958
Tssr81959 8 82380080 to 82380096 16 - TSS region transcription start site region 81959
Tssr81960 8 82380265 to 82380283 18 - TSS region transcription start site region 81960
Tssr81961 8 82380301 to 82380321 20 - TSS region transcription start site region 81961
Tssr81962 8 82389945 to 82389990 45 - TSS region transcription start site region 81962
Tssr81963 8 82391919 to 82391938 19 - TSS region transcription start site region 81963
Tssr81964 8 82391978 to 82391999 21 - TSS region transcription start site region 81964
Tssr81965 8 82392109 to 82392126 17 - TSS region transcription start site region 81965
Tssr81966 8 82392398 to 82392430 32 - TSS region transcription start site region 81966
Tssr81967 8 82392460 to 82392524 64 - TSS region transcription start site region 81967
Tssr81968 8 82392532 to 82392548 16 - TSS region transcription start site region 81968
Tssr81969 8 82392651 to 82392662 11 - TSS region transcription start site region 81969
Tssr81970 8 82394651 to 82394663 12 - TSS region transcription start site region 81970
Tssr81971 8 82398603 to 82398718 115 - TSS region transcription start site region 81971
Tssr81972 8 82401639 to 82401650 11 - TSS region transcription start site region 81972
Tssr81973 8 82401656 to 82401668 12 - TSS region transcription start site region 81973
Tssr81974 8 82401793 to 82401807 14 - TSS region transcription start site region 81974
Tssr81975 8 82401808 to 82401855 47 - TSS region transcription start site region 81975
Tssr78216 8 82401928 to 82401974 46 + TSS region transcription start site region 78216
Tssr81976 8 82402367 to 82402388 21 - TSS region transcription start site region 81976
Tssr81977 8 82402424 to 82402441 17 - TSS region transcription start site region 81977
Tssr81978 8 82402451 to 82402469 18 - TSS region transcription start site region 81978
Tssr81979 8 82402486 to 82402491 5 - TSS region transcription start site region 81979
Tssr81980 8 82402494 to 82402504 10 - TSS region transcription start site region 81980
Tssr81981 8 82402526 to 82402567 41 - TSS region transcription start site region 81981
Tssr81982 8 82402623 to 82402635 12 - TSS region transcription start site region 81982
Tssr81983 8 82402745 to 82402785 40 - TSS region transcription start site region 81983
Tssr81984 8 82402788 to 82402840 52 - TSS region transcription start site region 81984
Tssr81985 8 82402880 to 82402901 21 - TSS region transcription start site region 81985
Tssr81986 8 82402981 to 82402998 17 - TSS region transcription start site region 81986
Tssr81987 8 82403014 to 82403034 20 - TSS region transcription start site region 81987
Tssr81988 8 82403152 to 82403163 11 - TSS region transcription start site region 81988
Tssr81989 8 82403203 to 82403227 24 - TSS region transcription start site region 81989
Tssr81990 8 82403238 to 82403247 9 - TSS region transcription start site region 81990
9530004M14Rik 8 82403315 to 82403718 403 lncRNA gene RIKEN cDNA 9530004M14 gene
Gm25138 8 82409091 to 82409226 135 + snoRNA gene predicted gene, 25138
Tssr81991 8 82420088 to 82420101 13 - TSS region transcription start site region 81991
Gm8167 8 82577767 to 82578724 957 + pseudogene predicted gene 8167
Hbnr11 8 82600207 to 82600347 140 QTL Heligmosomoides bakeri nematode resistance 11
D8Mit195 8 82600207 to 82600347 140 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 195
Tssr81992 8 82660856 to 82660876 20 - TSS region transcription start site region 81992
Tssr2615 8 82682359 to 82682365 6 + TSS region transcription start site region 2615
D8Mit161 8 82743341 to 82743451 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 161
Gm9655 8 82747617 to 82755694 8077 + pseudogene predicted gene 9655
Gm8025 8 82748171 to 82755051 6880 unclassified gene predicted gene 8025
Zfp330 8 82763620 to 82774126 10506 - protein coding gene zinc finger protein 330
Cpgi20636 8 82773780 to 82774327 547 CpG island CpG island 20636
Tssr2616 8 82774078 to 82774087 9 - TSS region transcription start site region 2616
Tssr81993 8 82774106 to 82774163 57 - TSS region transcription start site region 81993
Tssr81994 8 82774170 to 82774181 11 - TSS region transcription start site region 81994
Tssr78217 8 82774234 to 82774263 29 + TSS region transcription start site region 78217
Tssr78218 8 82774767 to 82774776 9 + TSS region transcription start site region 78218
Tssr78219 8 82774790 to 82774796 6 + TSS region transcription start site region 78219
Gm31545 8 82796146 to 82803361 7215 - lincRNA gene predicted gene, 31545
Tssr81995 8 82848114 to 82848121 7 - TSS region transcription start site region 81995
Cpgi20637 8 82863269 to 82864676 1407 CpG island CpG island 20637
Tssr78220 8 82863282 to 82863297 15 + TSS region transcription start site region 78220
Tssr78221 8 82863351 to 82863397 46 + TSS region transcription start site region 78221
Rnf150 8 82863356 to 83091268 227912 + protein coding gene ring finger protein 150
Tssr78222 8 82863398 to 82863409 11 + TSS region transcription start site region 78222
Tssr78223 8 82863453 to 82863474 21 + TSS region transcription start site region 78223
Tssr78224 8 82863483 to 82863505 22 + TSS region transcription start site region 78224
Tssr78225 8 82863810 to 82863839 29 + TSS region transcription start site region 78225
Tssr78226 8 82863996 to 82864020 24 + TSS region transcription start site region 78226
Gm46045 8 82896061 to 82897291 1230 + pseudogene predicted gene, 46045
D8Mit346 8 82930139 to 82930263 124 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 346
Tssr78227 8 82932446 to 82932460 14 + TSS region transcription start site region 78227
Gm18212 8 82952512 to 82953400 888 + pseudogene predicted gene, 18212
Gm45449 8 83082258 to 83086957 4699 - antisense lncRNA gene predicted gene 45449
Tssr78228 8 83084299 to 83084343 44 + TSS region transcription start site region 78228
Tssr78229 8 83085162 to 83085170 8 + TSS region transcription start site region 78229
Tssr81996 8 83086902 to 83086914 12 - TSS region transcription start site region 81996
Tssr78230 8 83087279 to 83087286 7 + TSS region transcription start site region 78230
Tssr78231 8 83087901 to 83087947 46 + TSS region transcription start site region 78231
Tssr81997 8 83106095 to 83106130 35 - TSS region transcription start site region 81997
Tssr78232 8 83153207 to 83153227 20 + TSS region transcription start site region 78232
Tssr78233 8 83155771 to 83155793 22 + TSS region transcription start site region 78233
Tssr78234 8 83155795 to 83155818 23 + TSS region transcription start site region 78234
Gm10645 8 83165081 to 83166170 1089 - protein coding gene predicted gene 10645
Cpgi20638 8 83165260 to 83166409 1149 CpG island CpG island 20638
Tssr78235 8 83165348 to 83165360 12 + TSS region transcription start site region 78235
Tbc1d9 8 83165352 to 83272934 107582 + protein coding gene TBC1 domain family, member 9
Tssr78236 8 83165361 to 83165399 38 + TSS region transcription start site region 78236
Tssr78237 8 83165419 to 83165440 21 + TSS region transcription start site region 78237
Tssr78238 8 83165448 to 83165499 51 + TSS region transcription start site region 78238
Tssr78239 8 83165502 to 83165523 21 + TSS region transcription start site region 78239
Tssr78240 8 83165554 to 83165571 17 + TSS region transcription start site region 78240
Tssr78241 8 83165578 to 83165607 29 + TSS region transcription start site region 78241
Tssr78242 8 83165622 to 83165646 24 + TSS region transcription start site region 78242
Tssr78243 8 83165656 to 83165677 21 + TSS region transcription start site region 78243
Tssr78244 8 83165681 to 83165695 14 + TSS region transcription start site region 78244
Tssr78245 8 83166036 to 83166054 18 + TSS region transcription start site region 78245
Tssr78246 8 83166136 to 83166152 16 + TSS region transcription start site region 78246
Tssr78247 8 83168654 to 83168663 9 + TSS region transcription start site region 78247
Tssr78248 8 83170669 to 83170690 21 + TSS region transcription start site region 78248
Tssr78249 8 83172889 to 83172903 14 + TSS region transcription start site region 78249
D8Mit106 8 83180780 to 83180928 148 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 106
Tssr78250 8 83200856 to 83200874 18 + TSS region transcription start site region 78250
Gm42027 8 83222909 to 83229996 7087 + lncRNA gene predicted gene, 42027
D8Mit265 8 83223760 to 83223860 100 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 265
Tssr78251 8 83236074 to 83236077 3 + TSS region transcription start site region 78251
Tssr78252 8 83243101 to 83243112 11 + TSS region transcription start site region 78252
Tssr78253 8 83245848 to 83245860 12 + TSS region transcription start site region 78253
Tssr78254 8 83251286 to 83251303 17 + TSS region transcription start site region 78254
Tssr78255 8 83251308 to 83251324 16 + TSS region transcription start site region 78255
Tssr78256 8 83259312 to 83259339 27 + TSS region transcription start site region 78256
Gm17999 8 83267086 to 83267627 541 + pseudogene predicted gene, 17999
D8Mit247 8 83279652 to 83279780 128 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 247
Cpgi20639 8 83290095 to 83290615 520 CpG island CpG island 20639
Tssr78257 8 83290342 to 83290358 16 + TSS region transcription start site region 78257
Ucp1 8 83290352 to 83298452 8100 + protein coding gene uncoupling protein 1 (mitochondrial, proton carrier)
Tssr78258 8 83290623 to 83290670 47 + TSS region transcription start site region 78258
Elmod2 8 83312632 to 83332486 19854 - protein coding gene ELMO/CED-12 domain containing 2
Cpgi20640 8 83331898 to 83332859 961 CpG island CpG island 20640
Tssr81998 8 83332367 to 83332370 3 - TSS region transcription start site region 81998
Tssr81999 8 83332416 to 83332494 78 - TSS region transcription start site region 81999
Gm32327 8 83332569 to 83338952 6383 + lncRNA gene predicted gene, 32327
Tssr78259 8 83332611 to 83332647 36 + TSS region transcription start site region 78259
Cpgi20641 8 83348323 to 83348856 533 CpG island CpG island 20641
Tssr78260 8 83348438 to 83348450 12 + TSS region transcription start site region 78260
Tssr78261 8 83348451 to 83348481 30 + TSS region transcription start site region 78261
Mgat4d 8 83348472 to 83379402 30930 + protein coding gene MGAT4 family, member C
Tssr78262 8 83348737 to 83348745 8 + TSS region transcription start site region 78262
Gm15660 8 83352556 to 83353033 477 + pseudogene predicted gene 15660
Gm32377 8 83381469 to 83389473 8004 - lncRNA gene predicted gene, 32377
Cpgi20642 8 83389611 to 83390358 747 CpG island CpG island 20642
Tssr82000 8 83389724 to 83389735 11 - TSS region transcription start site region 82000
Tssr78263 8 83389834 to 83389845 11 + TSS region transcription start site region 78263
Tssr78264 8 83389846 to 83389872 26 + TSS region transcription start site region 78264
Clgn 8 83389867 to 83428552 38685 + protein coding gene calmegin
Tssr78265 8 83389880 to 83389889 9 + TSS region transcription start site region 78265
Scoc 8 83434492 to 83458439 23947 - protein coding gene short coiled-coil protein
Cpgi20643 8 83441849 to 83442858 1009 CpG island CpG island 20643
Tssr82001 8 83442424 to 83442436 12 - TSS region transcription start site region 82001
Tssr82002 8 83442442 to 83442467 25 - TSS region transcription start site region 82002
Tssr82003 8 83442478 to 83442507 29 - TSS region transcription start site region 82003
Tssr82004 8 83442521 to 83442543 22 - TSS region transcription start site region 82004
Tssr82005 8 83442583 to 83442594 11 - TSS region transcription start site region 82005
Tssr82006 8 83442608 to 83442630 22 - TSS region transcription start site region 82006
Tssr82007 8 83442656 to 83442667 11 - TSS region transcription start site region 82007
Tssr82008 8 83458352 to 83458365 13 - TSS region transcription start site region 82008
Tssr82009 8 83458386 to 83458397 11 - TSS region transcription start site region 82009
Tssr82010 8 83458406 to 83458417 11 - TSS region transcription start site region 82010
Tssr82011 8 83458435 to 83458442 7 - TSS region transcription start site region 82011
Gm5910 8 83477572 to 83479116 1544 - pseudogene predicted gene 5910
Gm33242 8 83489916 to 83490829 913 - pseudogene predicted gene, 33242
Olfr370 8 83541093 to 83542188 1095 + protein coding gene olfactory receptor 370
Cpgi20644 8 83541505 to 83541661 156 CpG island CpG island 20644
Gm18000 8 83547557 to 83548264 707 + pseudogene predicted gene, 18000
Cpgi20645 8 83566455 to 83567269 814 CpG island CpG island 20645
Tssr78266 8 83566724 to 83566815 91 + TSS region transcription start site region 78266
Ndufb7 8 83566758 to 83571623 4865 + protein coding gene NADH:ubiquinone oxidoreductase subunit B7
Tecr 8 83571698 to 83594491 22793 - protein coding gene trans-2,3-enoyl-CoA reductase
Tssr82012 8 83571760 to 83571774 14 - TSS region transcription start site region 82012
Tssr82013 8 83571822 to 83571866 44 - TSS region transcription start site region 82013
Tssr82014 8 83572291 to 83572318 27 - TSS region transcription start site region 82014
Tssr82015 8 83572430 to 83572471 41 - TSS region transcription start site region 82015
Tssr82016 8 83572595 to 83572627 32 - TSS region transcription start site region 82016
Tssr82017 8 83572708 to 83572740 32 - TSS region transcription start site region 82017
Tssr82018 8 83572916 to 83572954 38 - TSS region transcription start site region 82018
Tssr82019 8 83573063 to 83573070 7 - TSS region transcription start site region 82019
Tssr82020 8 83573106 to 83573121 15 - TSS region transcription start site region 82020
Tssr82021 8 83573142 to 83573149 7 - TSS region transcription start site region 82021
Tssr82022 8 83573189 to 83573216 27 - TSS region transcription start site region 82022
Tssr82023 8 83573222 to 83573271 49 - TSS region transcription start site region 82023
Tssr82024 8 83573451 to 83573465 14 - TSS region transcription start site region 82024
Tssr82025 8 83573501 to 83573512 11 - TSS region transcription start site region 82025