Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:81215558-82365908

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45539 8 81294636 to 81295063 427 - pseudogene predicted gene 45539
Gm5354 8 81308177 to 81309149 972 - pseudogene predicted gene 5354
D8Mit263 8 81310865 to 81310989 124 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 263
Cpgi20635 8 81342007 to 81343033 1026 CpG island CpG island 20635
Tssr78167 8 81342501 to 81342510 9 + TSS region transcription start site region 78167
Tssr78168 8 81342524 to 81342545 21 + TSS region transcription start site region 78168
Inpp4b 8 81342556 to 82127914 785358 + protein coding gene inositol polyphosphate-4-phosphatase, type II
Tssr78169 8 81342561 to 81342575 14 + TSS region transcription start site region 78169
Tssr78170 8 81342607 to 81342617 10 + TSS region transcription start site region 78170
Tssr78171 8 81342701 to 81342718 17 + TSS region transcription start site region 78171
Tssr78172 8 81353166 to 81353168 2 + TSS region transcription start site region 78172
Tssr78173 8 81364224 to 81364225 1 + TSS region transcription start site region 78173
D8Mit235 8 81408279 to 81408403 124 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 235
Tssr81933 8 81491881 to 81491886 5 - TSS region transcription start site region 81933
D8Mit102 8 81498125 to 81498272 147 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 102
Tssr78174 8 81498664 to 81498667 3 + TSS region transcription start site region 78174
5830456J23Rik 8 81517923 to 81519167 1244 unclassified gene RIKEN cDNA 5830456J23 gene
Tssr78175 8 81558885 to 81558896 11 + TSS region transcription start site region 78175
Tssr78176 8 81558968 to 81558972 4 + TSS region transcription start site region 78176
Tssr78177 8 81559002 to 81559011 9 + TSS region transcription start site region 78177
Tssr78178 8 81559033 to 81559050 17 + TSS region transcription start site region 78178
4930579O11Rik 8 81665876 to 81667118 1242 - unclassified gene RIKEN cDNA 4930579O11 gene
Tssr78179 8 81667186 to 81667193 7 + TSS region transcription start site region 78179
Tssr78180 8 81731838 to 81731854 16 + TSS region transcription start site region 78180
Tssr78181 8 81756896 to 81756912 16 + TSS region transcription start site region 78181
Tssr78182 8 81766332 to 81766339 7 + TSS region transcription start site region 78182
Tssr78183 8 81766537 to 81766581 44 + TSS region transcription start site region 78183
Tssr78184 8 81767574 to 81767584 10 + TSS region transcription start site region 78184
Tssr78185 8 81767626 to 81767650 24 + TSS region transcription start site region 78185
Tssr78186 8 81767673 to 81767685 12 + TSS region transcription start site region 78186
Tssr78187 8 81767751 to 81767763 12 + TSS region transcription start site region 78187
Tssr78188 8 81767792 to 81767806 14 + TSS region transcription start site region 78188
Tssr78189 8 81767914 to 81767996 82 + TSS region transcription start site region 78189
Tssr78190 8 81768061 to 81768105 44 + TSS region transcription start site region 78190
Tssr78191 8 81768142 to 81768149 7 + TSS region transcription start site region 78191
Tssr78192 8 81768498 to 81768508 10 + TSS region transcription start site region 78192
Tssr78193 8 81768524 to 81768532 8 + TSS region transcription start site region 78193
Tssr78194 8 81769358 to 81769369 11 + TSS region transcription start site region 78194
Tssr78195 8 81770069 to 81770088 19 + TSS region transcription start site region 78195
Tssr78196 8 81770111 to 81770121 10 + TSS region transcription start site region 78196
Tssr78197 8 81770571 to 81770576 5 + TSS region transcription start site region 78197
Tssr78198 8 81770682 to 81770689 7 + TSS region transcription start site region 78198
Tssr78199 8 81770722 to 81770739 17 + TSS region transcription start site region 78199
Tssr78200 8 81773105 to 81773120 15 + TSS region transcription start site region 78200
Tssr78201 8 81775677 to 81775690 13 + TSS region transcription start site region 78201
Tssr78202 8 81775742 to 81775760 18 + TSS region transcription start site region 78202
Tssr78203 8 81775795 to 81775811 16 + TSS region transcription start site region 78203
Tssr78204 8 81775855 to 81775871 16 + TSS region transcription start site region 78204
Tssr78205 8 81779924 to 81779926 2 + TSS region transcription start site region 78205
Tssr81934 8 81780569 to 81780574 5 - TSS region transcription start site region 81934
Gm17169 8 81790558 to 81790908 350 - pseudogene predicted gene 17169
D8Mit262 8 81816938 to 81817062 124 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 262
Tssr81935 8 81823124 to 81823173 49 - TSS region transcription start site region 81935
Tssr78206 8 81825125 to 81825162 37 + TSS region transcription start site region 78206
Gm17072 8 81827698 to 81828355 657 + pseudogene predicted gene 17072
Tssr81936 8 81854667 to 81854679 12 - TSS region transcription start site region 81936
Tssr81937 8 81854686 to 81854693 7 - TSS region transcription start site region 81937
Tssr78207 8 81856054 to 81856066 12 + TSS region transcription start site region 78207
Tssr78208 8 81856324 to 81856376 52 + TSS region transcription start site region 78208
Tssr78209 8 81856378 to 81856399 21 + TSS region transcription start site region 78209
Tssr78210 8 81861678 to 81861686 8 + TSS region transcription start site region 78210
Tssr78211 8 81871565 to 81871572 7 + TSS region transcription start site region 78211
Tssr78212 8 81872216 to 81872219 3 + TSS region transcription start site region 78212
Tssr81938 8 81882011 to 81882014 3 - TSS region transcription start site region 81938
D8Mit104 8 81910053 to 81910195 142 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 104
Tssr78213 8 82041774 to 82041791 17 + TSS region transcription start site region 78213
Tssr78214 8 82054105 to 82054111 6 + TSS region transcription start site region 78214
Tssr78215 8 82084332 to 82084335 3 + TSS region transcription start site region 78215
D8Mit234 8 82130681 to 82130801 120 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 234
Gm25267 8 82152720 to 82152782 62 - snRNA gene predicted gene, 25267
Gm9520 8 82160609 to 82161161 552 + pseudogene predicted gene 9520
Gm38590 8 82190625 to 82207362 16737 - lincRNA gene predicted gene, 38590
Tssr81939 8 82207373 to 82207383 10 - TSS region transcription start site region 81939
D8Mit77 8 82224701 to 82224855 154 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 77
D8Mit305 8 82315168 to 82315285 117 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 305
Il15 8 82331632 to 82403222 71590 - protein coding gene interleukin 15
Tssr81940 8 82332476 to 82332505 29 - TSS region transcription start site region 81940
Tssr81941 8 82340727 to 82340738 11 - TSS region transcription start site region 81941
Tssr81942 8 82340773 to 82340787 14 - TSS region transcription start site region 81942
Tssr81943 8 82353408 to 82353422 14 - TSS region transcription start site region 81943
Tssr81944 8 82353452 to 82353480 28 - TSS region transcription start site region 81944
Tssr81945 8 82353495 to 82353531 36 - TSS region transcription start site region 81945
Tssr81946 8 82353550 to 82353584 34 - TSS region transcription start site region 81946
Tssr81947 8 82354333 to 82354347 14 - TSS region transcription start site region 81947
Tssr81948 8 82356165 to 82356178 13 - TSS region transcription start site region 81948
Tssr81949 8 82357014 to 82357032 18 - TSS region transcription start site region 81949
Tssr81950 8 82357395 to 82357406 11 - TSS region transcription start site region 81950
Vtbt5 8 82357768 to 82357920 152 QTL vertebral trabecular bone trait 5
D8Mit75 8 82357768 to 82357920 152 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 75
Tssr81951 8 82358530 to 82358567 37 - TSS region transcription start site region 81951