Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:8005065-8665080

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr80295 8 8021158 to 8021161 3 - TSS region transcription start site region 80295
Gm31401 8 8082540 to 8093215 10675 + lincRNA gene predicted gene, 31401
Tssr80296 8 8226463 to 8226473 10 - TSS region transcription start site region 80296
Gm45076 8 8334081 to 8336213 2132 - lincRNA gene predicted gene 45076
Tssr76153 8 8335065 to 8335080 15 + TSS region transcription start site region 76153
A630009H07Rik 8 8335077 to 8342428 7351 + lincRNA gene RIKEN cDNA A630009H07 gene
Gm31343 8 8377090 to 8391702 14612 + lincRNA gene predicted gene, 31343
Gm31135 8 8436606 to 8484728 48122 - lincRNA gene predicted gene, 31135
Gm2448 8 8454871 to 8455429 558 - pseudogene predicted gene 2448
Tssr80297 8 8457435 to 8457437 2 - TSS region transcription start site region 80297
Tssr80298 8 8484701 to 8484731 30 - TSS region transcription start site region 80298
Tssr80299 8 8484736 to 8484750 14 - TSS region transcription start site region 80299
D530014G21Rik 8 8488302 to 8495535 7233 + lincRNA gene RIKEN cDNA D530014G21 gene
Tssr76154 8 8533654 to 8533663 9 + TSS region transcription start site region 76154
Gm31463 8 8576522 to 8580342 3820 + lincRNA gene predicted gene, 31463
Gm45075 8 8612264 to 8615862 3598 + lincRNA gene predicted gene 45075
Efnb2 8 8617434 to 8661242 43808 - protein coding gene ephrin B2
Tssr80300 8 8617553 to 8617558 5 - TSS region transcription start site region 80300
Tssr80301 8 8618705 to 8618709 4 - TSS region transcription start site region 80301
Cpgi20060 8 8620557 to 8621088 531 CpG island CpG island 20060
Tssr80302 8 8621291 to 8621320 29 - TSS region transcription start site region 80302
E230020D15Rik 8 8629175 to 8635073 5898 - unclassified gene RIKEN cDNA E230020D15 gene
Gm45074 8 8637966 to 8639205 1239 - unclassified gene predicted gene 45074
Gm45073 8 8642766 to 8647012 4246 - unclassified gene predicted gene 45073
Tssr80303 8 8657739 to 8657744 5 - TSS region transcription start site region 80303
Cpgi20061 8 8659450 to 8662099 2649 CpG island CpG island 20061
Tssr80304 8 8661232 to 8661249 17 - TSS region transcription start site region 80304
Tssr76155 8 8661794 to 8661806 12 + TSS region transcription start site region 76155
4921522P10Rik 8 8661801 to 8664728 2927 + lincRNA gene RIKEN cDNA 4921522P10 gene
Tssr76156 8 8661807 to 8661817 10 + TSS region transcription start site region 76156
Tssr76157 8 8661819 to 8661826 7 + TSS region transcription start site region 76157