Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:79664278-80154350

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Otud4 8 79639676 to 79677755 38079 + protein coding gene OTU domain containing 4
Tpd52-ps 8 79680284 to 79680806 522 - pseudogene tumor protein D52, pseudogene
Cpgi20625 8 79680526 to 79680964 438 CpG island CpG island 20625
Tssr81885 8 79680826 to 79680829 3 - TSS region transcription start site region 81885
Abce1 8 79683462 to 79711740 28278 - protein coding gene ATP-binding cassette, sub-family E (OABP), member 1
Gm27006 8 79705597 to 79706539 942 + pseudogene predicted gene, 27006
Cpgi20626 8 79711168 to 79712078 910 CpG island CpG island 20626
Tssr81886 8 79711620 to 79711630 10 - TSS region transcription start site region 81886
Tssr81887 8 79711631 to 79711695 64 - TSS region transcription start site region 81887
Tssr78147 8 79711741 to 79711789 48 + TSS region transcription start site region 78147
Tssr78148 8 79711792 to 79711827 35 + TSS region transcription start site region 78148
Anapc10 8 79711820 to 79779059 67239 + protein coding gene anaphase promoting complex subunit 10
Tssr78149 8 79711833 to 79711884 51 + TSS region transcription start site region 78149
Tssr78150 8 79711894 to 79711910 16 + TSS region transcription start site region 78150
Tssr81888 8 79712743 to 79712746 3 - TSS region transcription start site region 81888
Tssr78151 8 79712912 to 79712924 12 + TSS region transcription start site region 78151
Tssr78152 8 79712950 to 79712965 15 + TSS region transcription start site region 78152
Gm45435 8 79747267 to 79752413 5146 - antisense lncRNA gene predicted gene 45435
Tssr78153 8 79750018 to 79750020 2 + TSS region transcription start site region 78153
Gm45434 8 79772878 to 79773170 292 - pseudogene predicted gene 45434
Gm45433 8 79803365 to 79803611 246 - pseudogene predicted gene 45433
Gm30494 8 79836777 to 79845820 9043 + lncRNA gene predicted gene, 30494
Gm45432 8 79863664 to 79864079 415 - pseudogene predicted gene 45432
Tssr81889 8 79864099 to 79864118 19 - TSS region transcription start site region 81889
n-TKctt20 8 79909278 to 79909350 72 + tRNA gene nuclear encoded tRNA lysine 20 (anticodon TTT)
Hhip 8 79965851 to 80058006 92155 - protein coding gene Hedgehog-interacting protein
Gm27820 8 79970390 to 79970564 174 + unclassified non-coding RNA gene predicted gene, 27820
Gm39206 8 80002398 to 80007412 5014 + lncRNA gene predicted gene, 39206
D8Mit134 8 80032536 to 80032655 119 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 134
Cpgi20627 8 80057223 to 80058559 1336 CpG island CpG island 20627
Tssr81890 8 80057506 to 80057564 58 - TSS region transcription start site region 81890
Tssr81891 8 80057989 to 80058017 28 - TSS region transcription start site region 81891
Cfq10 8 80066775 to 89014359 8947584 QTL conditioned fear QTL 10
Gm33096 8 80086205 to 80086697 492 - pseudogene predicted gene, 33096
Gm5909 8 80110806 to 80112086 1280 - pseudogene predicted gene 5909
Gm45431 8 80128194 to 80138667 10473 - lincRNA gene predicted gene 45431
D8Mit146 8 80146537 to 80146655 118 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 146