Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:79341142-79649737

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smad1 8 79338395 to 79399468 61073 - protein coding gene SMAD family member 1
Tssr78134 8 79356120 to 79356151 31 + TSS region transcription start site region 78134
Tssr81875 8 79356461 to 79356493 32 - TSS region transcription start site region 81875
Tssr81876 8 79372646 to 79372669 23 - TSS region transcription start site region 81876
Tssr81877 8 79374537 to 79374548 11 - TSS region transcription start site region 81877
Gm30389 8 79394726 to 79404683 9957 + lncRNA gene predicted gene, 30389
Cpgi20623 8 79398204 to 79399788 1584 CpG island CpG island 20623
Tssr81878 8 79399417 to 79399435 18 - TSS region transcription start site region 81878
Tssr81879 8 79399451 to 79399462 11 - TSS region transcription start site region 81879
Tssr81880 8 79399467 to 79399472 5 - TSS region transcription start site region 81880
Tssr81881 8 79399476 to 79399481 5 - TSS region transcription start site region 81881
Tssr81882 8 79399499 to 79399510 11 - TSS region transcription start site region 81882
Tssr81883 8 79399513 to 79399532 19 - TSS region transcription start site region 81883
Gm45601 8 79404148 to 79411216 7068 + lincRNA gene predicted gene 45601
Gm39205 8 79440341 to 79448774 8433 + lncRNA gene predicted gene, 39205
Tssr78135 8 79458874 to 79458875 1 + TSS region transcription start site region 78135
Gm39288 8 79489741 to 79490186 445 - pseudogene predicted gene, 39288
Gm45602 8 79491142 to 79499737 8595 + lincRNA gene predicted gene 45602
Gm8077 8 79497155 to 79498178 1023 - pseudogene predicted gene 8077
Tssr78136 8 79546286 to 79546332 46 + TSS region transcription start site region 78136
Gm8079 8 79549774 to 79550748 974 - pseudogene predicted gene 8079
Tssr81884 8 79638711 to 79638717 6 - TSS region transcription start site region 81884
Cpgi20624 8 79638747 to 79640439 1692 CpG island CpG island 20624
Tssr78137 8 79639351 to 79639398 47 + TSS region transcription start site region 78137
Tssr78138 8 79639399 to 79639424 25 + TSS region transcription start site region 78138
Tssr78139 8 79639426 to 79639471 45 + TSS region transcription start site region 78139
Tssr78140 8 79639492 to 79639519 27 + TSS region transcription start site region 78140
Tssr78141 8 79639642 to 79639730 88 + TSS region transcription start site region 78141
Otud4 8 79639676 to 79677755 38079 + protein coding gene OTU domain containing 4
Tssr78142 8 79639763 to 79639780 17 + TSS region transcription start site region 78142
Tssr78143 8 79640176 to 79640187 11 + TSS region transcription start site region 78143
Tssr78144 8 79640195 to 79640218 23 + TSS region transcription start site region 78144
Tssr78145 8 79640223 to 79640241 18 + TSS region transcription start site region 78145