Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:78509865-79116140

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi20616 8 78508315 to 78509946 1631 CpG island CpG island 20616
Slc10a7 8 78509346 to 78734003 224657 + protein coding gene solute carrier family 10 (sodium/bile acid cotransporter family), member 7
Tssr78119 8 78589399 to 78589401 2 + TSS region transcription start site region 78119
Gm2253 8 78604294 to 78604707 413 + pseudogene predicted gene 2253
Cpgi20617 8 78630484 to 78630645 161 CpG island CpG island 20617
Gm39203 8 78675558 to 78678997 3439 + lncRNA gene predicted gene, 39203
D8Mit103 8 78700043 to 78700145 102 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 103
Tssr78120 8 78733531 to 78733534 3 + TSS region transcription start site region 78120
D8Mit345.2 8 78742112 to 78742266 154 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 345.2
D8Mit345 8 78742253 to 78742360 107 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 345
Gm47209 8 78754916 to 78774545 19629 - pseudogene predicted gene, 47209
Gm45446 8 78778002 to 78778217 215 - pseudogene predicted gene 45446
Lsm6 8 78804865 to 78821140 16275 - protein coding gene LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Tssr81864 8 78810221 to 78810235 14 - TSS region transcription start site region 81864
Tssr81865 8 78810282 to 78810295 13 - TSS region transcription start site region 81865
Tssr81866 8 78813085 to 78813118 33 - TSS region transcription start site region 81866
Tssr81867 8 78813189 to 78813200 11 - TSS region transcription start site region 81867
Tssr81868 8 78813210 to 78813275 65 - TSS region transcription start site region 81868
Cpgi20618 8 78820664 to 78821279 615 CpG island CpG island 20618
Tssr81869 8 78821078 to 78821119 41 - TSS region transcription start site region 81869
Tssr81870 8 78821136 to 78821143 7 - TSS region transcription start site region 81870
Gm8054 8 78869402 to 78869869 467 - pseudogene predicted pseudogene 8054
Gm45326 8 78950851 to 78953914 3063 - lincRNA gene predicted gene 45326
Gm8056 8 78986229 to 78987093 864 - pseudogene predicted gene 8056
Tssr78121 8 78993256 to 78993258 2 + TSS region transcription start site region 78121
Gm39204 8 79007038 to 79014022 6984 + lincRNA gene predicted gene, 39204
Gm22044 8 79014364 to 79014470 106 - snRNA gene predicted gene, 22044
Tssr78122 8 79017543 to 79017554 11 + TSS region transcription start site region 78122
Cpgi20619 8 79027902 to 79028429 527 CpG island CpG island 20619
Tssr78123 8 79027969 to 79027978 9 + TSS region transcription start site region 78123
Tssr78124 8 79028178 to 79028237 59 + TSS region transcription start site region 78124
Tssr78125 8 79028253 to 79028309 56 + TSS region transcription start site region 78125
Tssr78126 8 79028317 to 79028350 33 + TSS region transcription start site region 78126
Tssr2612 8 79028351 to 79028366 15 + TSS region transcription start site region 2612
Zfp827 8 79028437 to 79193766 165329 + protein coding gene zinc finger protein 827
Tssr78127 8 79028565 to 79028613 48 + TSS region transcription start site region 78127
Tssr78128 8 79028629 to 79028654 25 + TSS region transcription start site region 78128
Cpgi20620 8 79028687 to 79031083 2396 CpG island CpG island 20620
D8Mit76 8 79048082 to 79048196 114 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 76
C030019G06Rik 8 79082476 to 79087720 5244 unclassified gene RIKEN cDNA C030019G06 gene