MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:78499346-78744003

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rbmxl1	8	78505269 to 78508898	3629	-	protein coding gene	RNA binding motif protein, X-linked like-1
Cpgi20616	8	78508315 to 78509946	1631		CpG island	CpG island 20616
Tssr78115	8	78508621 to 78508632	11	+	TSS region	transcription start site region 78115
Tssr81862	8	78508861 to 78508865	4	-	TSS region	transcription start site region 81862
Tssr81863	8	78508876 to 78508909	33	-	TSS region	transcription start site region 81863
Tssr78116	8	78509319 to 78509399	80	+	TSS region	transcription start site region 78116
Slc10a7	8	78509346 to 78734003	224657	+	protein coding gene	solute carrier family 10 (sodium/bile acid cotransporter family), member 7
Tssr78117	8	78509406 to 78509417	11	+	TSS region	transcription start site region 78117
Tssr78118	8	78509422 to 78509436	14	+	TSS region	transcription start site region 78118
Tssr78119	8	78589399 to 78589401	2	+	TSS region	transcription start site region 78119
Gm2253	8	78604294 to 78604707	413	+	pseudogene	predicted gene 2253
Cpgi20617	8	78630484 to 78630645	161		CpG island	CpG island 20617
Gm39203	8	78675558 to 78678997	3439	+	lncRNA gene	predicted gene, 39203
D8Mit103	8	78700043 to 78700145	102		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 103
Tssr78120	8	78733531 to 78733534	3	+	TSS region	transcription start site region 78120
D8Mit345.2	8	78742112 to 78742266	154		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 345.2
D8Mit345	8	78742253 to 78742360	107		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 345