Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:76312009-77492023

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45740 8 75992509 to 76415040 422531 - lincRNA gene predicted gene 45740
Gm7990 8 76395134 to 76395724 590 - pseudogene predicted gene 7990
Gm39199 8 76437089 to 76445882 8793 - lncRNA gene predicted gene, 39199
Tssr81823 8 76551847 to 76551854 7 - TSS region transcription start site region 81823
Gm27355 8 76619155 to 76619282 127 - rRNA gene predicted gene, 27355
Gm10649 8 76795761 to 76821102 25341 - bidirectional promoter lncRNA gene predicted gene 10649
Gm5353 8 76862256 to 76863048 792 - pseudogene predicted gene 5353
Cpgi20605 8 76898834 to 76901054 2220 CpG island CpG island 20605
Tssr78094 8 76899245 to 76899279 34 + TSS region transcription start site region 78094
Tssr78095 8 76899773 to 76899828 55 + TSS region transcription start site region 78095
Tssr78096 8 76899852 to 76899864 12 + TSS region transcription start site region 78096
Nr3c2 8 76900179 to 77244010 343831 + protein coding gene nuclear receptor subfamily 3, group C, member 2
Tssr78097 8 76901543 to 76901556 13 + TSS region transcription start site region 78097
Cpgi20606 8 76901563 to 76902681 1118 CpG island CpG island 20606
Tssr81824 8 76902009 to 76902023 14 - TSS region transcription start site region 81824
Tssr78098 8 76902277 to 76902376 99 + TSS region transcription start site region 78098
Tssr78099 8 77093375 to 77093378 3 + TSS region transcription start site region 78099
Gm24838 8 77146351 to 77146480 129 - snoRNA gene predicted gene, 24838
Cpgi20607 8 77185850 to 77186236 386 CpG island CpG island 20607
Gm23260 8 77194695 to 77194866 171 + snRNA gene predicted gene, 23260
Arhgap10 8 77250366 to 77517953 267587 - protein coding gene Rho GTPase activating protein 10
Gm45406 8 77282861 to 77286207 3346 + antisense lncRNA gene predicted gene 45406
Tssr81825 8 77286902 to 77286906 4 - TSS region transcription start site region 81825
Tssr81826 8 77289956 to 77289978 22 - TSS region transcription start site region 81826
4933421D24Rik 8 77305533 to 77313299 7766 + antisense lncRNA gene RIKEN cDNA 4933421D24 gene
Tssr81827 8 77310937 to 77310947 10 - TSS region transcription start site region 81827
Gm45285 8 77331970 to 77336922 4952 + antisense lncRNA gene predicted gene 45285
Gm45407 8 77368841 to 77372516 3675 - unclassified gene predicted gene 45407
Tssr81828 8 77376219 to 77376223 4 - TSS region transcription start site region 81828
Tssr81829 8 77387305 to 77387324 19 - TSS region transcription start site region 81829
Tssr81830 8 77387399 to 77387417 18 - TSS region transcription start site region 81830
Tssr81831 8 77387489 to 77387502 13 - TSS region transcription start site region 81831
Tssr81832 8 77433255 to 77433266 11 - TSS region transcription start site region 81832
Tssr81833 8 77452087 to 77452091 4 - TSS region transcription start site region 81833
Tssr81834 8 77466060 to 77466071 11 - TSS region transcription start site region 81834
Tssr81835 8 77477212 to 77477221 9 - TSS region transcription start site region 81835
D8Mit342 8 77489471 to 77489575 104 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 342