Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:75100026-76921139

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acigg8 8 61221786 to 75127057 13905271 QTL anti COL7 IgG2b antibody 8
Hmox1 8 75093621 to 75100589 6968 + protein coding gene heme oxygenase 1
Tssr78067 8 75100036 to 75100049 13 + TSS region transcription start site region 78067
Tssr78068 8 75100075 to 75100087 12 + TSS region transcription start site region 78068
Tssr78069 8 75100120 to 75100138 18 + TSS region transcription start site region 78069
Tssr78070 8 75100169 to 75100183 14 + TSS region transcription start site region 78070
Tssr78071 8 75100218 to 75100237 19 + TSS region transcription start site region 78071
Tssr78072 8 75100239 to 75100252 13 + TSS region transcription start site region 78072
Tssr78073 8 75100300 to 75100322 22 + TSS region transcription start site region 78073
Tssr78074 8 75100352 to 75100376 24 + TSS region transcription start site region 78074
Tssr78075 8 75100377 to 75100385 8 + TSS region transcription start site region 78075
Tssr78076 8 75100416 to 75100430 14 + TSS region transcription start site region 78076
Tssr78077 8 75100508 to 75100525 17 + TSS region transcription start site region 78077
Tssr81820 8 75100586 to 75100593 7 - TSS region transcription start site region 81820
Cpgi20602 8 75109132 to 75110132 1000 CpG island CpG island 20602
Tssr81821 8 75109330 to 75109373 43 - TSS region transcription start site region 81821
Tssr78078 8 75109511 to 75109522 11 + TSS region transcription start site region 78078
Tssr78079 8 75109559 to 75109601 42 + TSS region transcription start site region 78079
Mcm5 8 75109569 to 75128439 18870 + protein coding gene minichromosome maintenance complex component 5
Tssr78080 8 75117611 to 75117627 16 + TSS region transcription start site region 78080
Tssr78081 8 75126236 to 75126277 41 + TSS region transcription start site region 78081
Gm45899 8 75176458 to 75177733 1275 + lincRNA gene predicted gene 45899
Gm45903 8 75201439 to 75210042 8603 + lincRNA gene predicted gene 45903
Gf7 8 75201479 to 75201479 0 QTL gonadal fat pad weight 7
Cpgi20603 8 75212618 to 75214185 1567 CpG island CpG island 20603
Tssr78082 8 75213179 to 75213257 78 + TSS region transcription start site region 78082
Tssr78083 8 75213259 to 75213285 26 + TSS region transcription start site region 78083
Tssr78084 8 75213288 to 75213297 9 + TSS region transcription start site region 78084
Tssr78085 8 75213325 to 75213334 9 + TSS region transcription start site region 78085
Tssr78086 8 75213356 to 75213369 13 + TSS region transcription start site region 78086
Tssr78087 8 75213430 to 75213461 31 + TSS region transcription start site region 78087
Tssr78088 8 75213482 to 75213492 10 + TSS region transcription start site region 78088
Rasd2 8 75213944 to 75224113 10169 + protein coding gene RASD family, member 2
Tssr78089 8 75219283 to 75219298 15 + TSS region transcription start site region 78089
Gm9644 8 75274482 to 75275664 1182 - pseudogene predicted gene 9644
Gm45907 8 75294570 to 75294762 192 + pseudogene predicted gene 45907
Cpgi20604 8 75383703 to 75383904 201 CpG island CpG island 20604
Umpk-ps 8 75383802 to 75384628 826 + pseudogene uridine monophosphate kinase, pseudogene
Gm7984 8 75398511 to 75399048 537 + pseudogene predicted gene 7984
Gm19885 8 75401968 to 75402310 342 + pseudogene predicted gene, 19885
D8Mit28 8 75404498 to 75404616 118 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 28
Gm10358 8 75405337 to 75406537 1200 - protein coding gene predicted gene 10358
Tssr81822 8 75406584 to 75406593 9 - TSS region transcription start site region 81822
Obq31 8 75409776 to 75409776 0 QTL obesity QTL 31
Iqcm 8 75448694 to 75984503 535809 + protein coding gene IQ motif containing M
Tssr78090 8 75448710 to 75448739 29 + TSS region transcription start site region 78090
Tssr78091 8 75448751 to 75448760 9 + TSS region transcription start site region 78091
Tssr78092 8 75448770 to 75448775 5 + TSS region transcription start site region 78092
Gm38270 8 75595779 to 75596185 406 - unclassified gene predicted gene, 38270
Gm7901 8 75711600 to 75713196 1596 - pseudogene predicted gene 7901
Tssr78093 8 75770902 to 75770904 2 + TSS region transcription start site region 78093
D8Mit282 8 75857530 to 75857647 117 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 282
D8Mit302 8 75857534 to 75857647 113 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 302
Gm45740 8 75992509 to 76415040 422531 - lincRNA gene predicted gene 45740
Gm45741 8 76010026 to 76011139 1113 + lincRNA gene predicted gene 45741
Gm22544 8 76021929 to 76022055 126 - snoRNA gene predicted gene, 22544
Gm45742 8 76116595 to 76117027 432 - pseudogene predicted gene 45742
Gm22509 8 76274344 to 76274450 106 - snRNA gene predicted gene, 22509
Gm45798 8 76289516 to 76296013 6497 + lincRNA gene predicted gene 45798
Gm7069 8 76293972 to 76294979 1007 + pseudogene predicted gene 7069
Gm7990 8 76395134 to 76395724 590 - pseudogene predicted gene 7990
Gm39199 8 76437089 to 76445882 8793 - lncRNA gene predicted gene, 39199
Tssr81823 8 76551847 to 76551854 7 - TSS region transcription start site region 81823
Gm27355 8 76619155 to 76619282 127 - rRNA gene predicted gene, 27355
Gm10649 8 76795761 to 76821102 25341 - bidirectional promoter lncRNA gene predicted gene 10649
Gm5353 8 76862256 to 76863048 792 - pseudogene predicted gene 5353
Cpgi20605 8 76898834 to 76901054 2220 CpG island CpG island 20605
Tssr78094 8 76899245 to 76899279 34 + TSS region transcription start site region 78094
Tssr78095 8 76899773 to 76899828 55 + TSS region transcription start site region 78095
Tssr78096 8 76899852 to 76899864 12 + TSS region transcription start site region 78096
Nr3c2 8 76900179 to 77244010 343831 + protein coding gene nuclear receptor subfamily 3, group C, member 2
Tssr78097 8 76901543 to 76901556 13 + TSS region transcription start site region 78097
Cpgi20606 8 76901563 to 76902681 1118 CpG island CpG island 20606
Tssr81824 8 76902009 to 76902023 14 - TSS region transcription start site region 81824
Tssr78098 8 76902277 to 76902376 99 + TSS region transcription start site region 78098