Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:72740136-72850487

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sin3b 8 72723285 to 72758201 34916 + protein coding gene transcriptional regulator, SIN3B (yeast)
Tssr78018 8 72741724 to 72741737 13 + TSS region transcription start site region 78018
Tssr78019 8 72741800 to 72741808 8 + TSS region transcription start site region 78019
Tssr78020 8 72741863 to 72741876 13 + TSS region transcription start site region 78020
Cpgi20593 8 72749757 to 72750013 256 CpG island CpG island 20593
Cpgi20594 8 72756748 to 72757445 697 CpG island CpG island 20594
Tssr78021 8 72761868 to 72761896 28 + TSS region transcription start site region 78021
F2rl3 8 72761880 to 72763874 1994 + protein coding gene coagulation factor II (thrombin) receptor-like 3
Cpgi20595 8 72762595 to 72762849 254 CpG island CpG island 20595
D8Mit133 8 72763829 to 72763978 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 133
Gm45705 8 72765481 to 72767614 2133 + unclassified gene predicted gene 45705
Gm45706 8 72765481 to 72767616 2135 - unclassified gene predicted gene 45706
Gm39198 8 72766388 to 72784995 18607 - lncRNA gene predicted gene, 39198
Gm45704 8 72771658 to 72784333 12675 - pseudogene predicted gene 45704
Tssr2607 8 72772905 to 72772908 3 + TSS region transcription start site region 2607
Gm45791 8 72795136 to 72795487 351 - pseudogene predicted gene 45791
Large1 8 72814599 to 73353540 538941 - protein coding gene LARGE xylosyl- and glucuronyltransferase 1
Tssr81804 8 72835983 to 72836020 37 - TSS region transcription start site region 81804
D8Mit303 8 72849157 to 72849275 118 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 303